RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 A0A0A6YYK5 440 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 AGAP14A8MT82 685 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MATN2O00339 956 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MED26O95402 600 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PRAMEF1O95521 474 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 IGHEP01854 428 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PRSS56P0CW18 603 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 KIR3DL1P43629 444 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PRLHRP49683 370 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CDKN1CP49918 316 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MSLNQ13421 630 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 BOP1Q14137 746 aaKnown RBP11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PRKD1Q15139 912 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 TLR1Q15399 786 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 SLC1A5Q15758 541 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 NKG7Q16617 165 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 AGAP7PQ5VUJ5 663 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 RPUSD3Q6P087 351 aaKnown RBP11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 SPNS3Q6ZMD2 512 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 GLT6D1Q7Z4J2 308 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 AMIGO1Q86WK6 493 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 GPR135Q8IZ08 494 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 NXPE1Q8N323 547 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ANKRD20A12PQ8NF67 263 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 OR11G2Q8NGC1 345 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 HM13Q8TCT9 377 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PSMF1Q92530 271 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 NR4A3Q92570 626 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 RBM41Q96IZ5 413 aaKnown RBP11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 AGAP4Q96P64 663 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 AP1M1Q9BXS5 423 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PACSIN1Q9BY11 444 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 FAM96AQ9H5X1 160 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 COG4Q9H9E3 785 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PLA2G3Q9NZ20 509 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 FAM153AQ9UHL3 310 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 KLHL20Q9Y2M5 609 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 AP1M2Q9Y6Q5 423 aa11.44□□□□□ -0.58
SPTLC1P3-201ENST00000403408 INTS1Q8N201 2190 aaKnown RBP11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 C2orf74A8MZ97 194 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 KLHL41O60662 606 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 SRP72O76094 671 aaKnown RBP11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ONECUT2O95948 504 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 COX6B1P14854 86 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MCM3P25205 808 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ITGA9Q13797 1035 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 KRT33BQ14525 404 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PDK1Q15118 436 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 FAM180AQ6UWF9 173 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 UNC5AQ6ZN44 842 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 OVCH1Q7RTY7 1134 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MAP7D3Q8IWC1 876 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ZNF808Q8N4W9 903 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 BCORP1Q8N888 145 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 OR4K2Q8NGD2 314 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 OR5AR1Q8NGP9 310 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 OR1N1Q8NGS0 311 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 THOC3Q96J01 351 aaKnown RBP11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ZNF830Q96NB3 372 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 SRPK1Q96SB4 655 aaKnown RBP11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 C17orf62Q9BQA9 187 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CCM2Q9BSQ5 444 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CHRNA10Q9GZZ6 450 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 LHPPQ9H008 270 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 SOX17Q9H6I2 414 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CTSFQ9UBX1 484 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CDC23Q9UJX2 597 aa11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 HRNRQ86YZ3 2850 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CPAMD8Q8IZJ3 1885 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 TRGV8A0A0C4DH27 118 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 LRRD1A4D1F6 860 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CCL21O00585 134 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CCL22O00626 93 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 F10P00742 488 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 AGTP01019 485 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 EPOP01588 193 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PECAM1P16284 738 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 HOXB4P17483 251 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 SOX11P35716 441 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 DYNLT1P63172 113 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 MFAP5Q13361 173 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ZDHHC20Q5W0Z9 365 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 CCDC70Q6NSX1 233 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ISLR2Q6UXK2 745 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 NCCRP1Q6ZVX7 275 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 IPMKQ8NFU5 416 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 OR13C4Q8NGS5 318 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 RUBCNLQ9H714 662 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ASB8Q9H765 288 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 SH3BGRL2Q9UJC5 107 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 PLAGL1Q9UM63 463 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 HEBP2Q9Y5Z4 205 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 JMJD1CQ15652 2540 aa11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 NSD1Q96L73 2696 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1P3-201ENST00000403408 A0A1B0GTH6 734 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 C17orf113A0A1B0GUU1 675 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 VSTM2BA6NLU5 285 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 ZNF487B1APH4 448 aa11.41□□□□□ -0.58
SPTLC1P3-201ENST00000403408 APOL1O14791 398 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms