RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ASIC5Q9NY37 505 aa11.97□□□□□ -0.49
CLIP4-203ENST00000401617 MCM8Q9UJA3 840 aa11.97□□□□□ -0.49
CLIP4-203ENST00000401617 FADS3Q9Y5Q0 445 aa11.97□□□□□ -0.49
CLIP4-203ENST00000401617 SERTM1A2A2V5 107 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 ARHGEF33A8MVX0 844 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 NPIPB8E9PQR5 432 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 NPC1O15118 1278 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 ANGPT2O15123 496 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 INPP4BO15327 924 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 RGS14O43566 566 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 EPHX1P07099 455 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 POLR2JP52435 117 aaKnown RBP11.96□□□□□ -0.49
CLIP4-203ENST00000401617 PFN3P60673 137 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 PCDH1Q08174 1060 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 NR6A1Q15406 480 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 ITPRIPL2Q3MIP1 535 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 SPATS1Q496A3 300 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 RFTN2Q52LD8 501 aaPredicted RBP11.96□□□□□ -0.49
CLIP4-203ENST00000401617 PIP5KL1Q5T9C9 394 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 FAM46CQ5VWP2 391 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 ZFP1Q6P2D0 407 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 XKR5Q6UX68 686 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 ZFAND4Q86XD8 727 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 RNF148Q8N7C7 305 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 FBXO15Q8NCQ5 510 aaPredicted RBP11.96□□□□□ -0.49
CLIP4-203ENST00000401617 DNAJC9Q8WXX5 260 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 LRCH3Q96II8 777 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 SLC45A3Q96JT2 553 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 LINC00615Q96LM1 132 aaPredicted RBP11.96□□□□□ -0.49
CLIP4-203ENST00000401617 ZCCHC2Q9C0B9 1178 aaKnown RBP11.96□□□□□ -0.49
CLIP4-203ENST00000401617 GID8Q9NWU2 228 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 PSMD13Q9UNM6 376 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 REV3LO60673 3130 aa11.96□□□□□ -0.49
CLIP4-203ENST00000401617 C9JVG2 144 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 FFAR3O14843 346 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 CASQ2O14958 399 aaPredicted RBP11.96□□□□□ -0.5
CLIP4-203ENST00000401617 GPR42O15529 346 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 PRAMEF4O60810 478 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 BAG2O95816 211 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 APODP05090 189 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 ACADSP16219 412 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 ATP6V1C1P21283 382 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 JAK1P23458 1154 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 GDI1P31150 447 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 DRD3P35462 400 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 MSX2P35548 267 aaPredicted RBP11.96□□□□□ -0.5
CLIP4-203ENST00000401617 KCNK10P57789 538 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 CNTN1Q12860 1018 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 CAMK2GQ13555 558 aaPredicted RBP11.96□□□□□ -0.5
CLIP4-203ENST00000401617 TAF11Q15544 211 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.96□□□□□ -0.5
CLIP4-203ENST00000401617 PRAMEF9Q5VWM5 478 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 CYP20A1Q6UW02 462 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 LAYNQ6UX15 382 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 LILRA3Q8N6C8 439 aaPredicted RBP11.96□□□□□ -0.5
CLIP4-203ENST00000401617 HIPK4Q8NE63 616 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 LRRC58Q96CX6 371 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 NAF1Q96HR8 494 aaKnown RBP11.96□□□□□ -0.5
CLIP4-203ENST00000401617 HBEGFQ99075 208 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 DOCK9Q9BZ29 2069 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 TRIM39Q9HCM9 518 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 FARSBQ9NSD9 589 aaKnown RBP11.96□□□□□ -0.5
CLIP4-203ENST00000401617 DNAJC11Q9NVH1 559 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 KLQ9UEF7 1012 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 ZNF490Q9ULM2 529 aaPredicted RBP11.96□□□□□ -0.5
CLIP4-203ENST00000401617 STON1Q9Y6Q2 735 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 NUMA1Q14980 2115 aa11.96□□□□□ -0.5
CLIP4-203ENST00000401617 TICRRQ7Z2Z1 1910 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 IFRD1O00458 451 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 AP1G1O43747 822 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 LZTS3O60299 673 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 NPPAP01160 153 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 KRT6AP02538 564 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 KRT6BP04259 564 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 G6PDP11413 515 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 PRPH2P23942 346 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 GPR1P46091 355 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 GNPDA1P46926 289 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 PREPP48147 710 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 KRT6CP48668 564 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 SLC7A2P52569 658 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 ABRQ12979 859 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 PRKG2Q13237 762 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 MAD2L1Q13257 205 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 KIAA0040Q15053 153 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 SYTL3Q4VX76 610 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 IL23RQ5VWK5 629 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 CES5AQ6NT32 575 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 SLC15A3Q8IY34 581 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 KBTBD2Q8IY47 623 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 RGL4Q8IZJ4 473 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 DPP10Q8N608 796 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 PPFIBP2Q8ND30 876 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 FAM156AQ8NDB6 213 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 BHLHE22Q8NFJ8 381 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 COX14Q96I36 57 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 ZNF514Q96K75 400 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 MAGEB10Q96LZ2 347 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 CCDC138Q96M89 665 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 SLC39A3Q9BRY0 314 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms