RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 E5RI56 91 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SMAPO00193 183 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 KPNA5O15131 536 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 URI1O94763 535 aaPredicted RBP13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TTC4O95801 387 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 FOLR1P15328 257 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ARL4CP56559 192 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SPANXN3Q5MJ09 141 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CEACAM20Q6UY09 585 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 MAATS1Q7Z4T9 603 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CALML6Q8TD86 181 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CD180Q99467 661 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 NAT9Q9BTE0 207 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 KLHL25Q9H0H3 589 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ZC3H7BQ9UGR2 993 aaKnown RBP13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CDC23Q9UJX2 597 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 VPS9D1Q9Y2B5 631 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SSUH2Q9Y2M2 353 aa13.66□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SMG1Q96Q15 3661 aaKnown RBP13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TEX51A0A1B0GUA7 166 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 FAM187AA6NFU0 413 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SLC9B1P1A6NJY1 282 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 H3BMM5 538 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 STMND1H3BQB6 276 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 EFSO43281 561 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 EBLN1P0CF75 366 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ZNF28P17035 718 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CDH3P22223 829 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 GABRB3P28472 473 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CLCN7P51798 805 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CXADRP78310 365 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 HSD11B2P80365 405 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PDIA2Q13087 525 aaKnown RBP13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 GRB7Q14451 532 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TRADDQ15628 312 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PLEKHS1Q5SXH7 462 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 BROXQ5VW32 411 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 DUPD1Q68J44 220 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TRMT10BQ6PF06 316 aaKnown RBP13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ZNF572Q7Z3I7 529 aaPredicted RBP13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 VASH2Q86V25 355 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 LMNTD2Q8IXW0 634 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 C2orf73Q8N5S3 287 aaPredicted RBP13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ZBTB2Q8N680 514 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SIDT2Q8NBJ9 832 aaKnown RBP13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 C2CD4AQ8NCU7 369 aaPredicted RBP13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 GIMAP7Q8NHV1 300 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 GSDMBQ8TAX9 411 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CERS2Q96G23 380 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 IL17FQ96PD4 163 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TEFMQ96QE5 360 aaKnown RBP13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 FAM167BQ9BTA0 163 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 MENTQ9BUN1 341 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SPRY4Q9C004 299 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PPANQ9NQ55 473 aaKnown RBP13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SPHK1Q9NYA1 384 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ACTR10Q9NZ32 417 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PILRAQ9UKJ1 303 aa13.65□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PIPSLA2A3N6 862 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 STK17BO94768 372 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ZBTB11O95625 1053 aaPredicted RBP13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CHRM5P08912 532 aaPredicted RBP13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PVRP15151 417 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ST6GAL1P15907 406 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CD82P27701 267 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SHMT2P34897 504 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CARSP49589 748 aaKnown RBP13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ARL4DP49703 201 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TUBB3Q13509 450 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CUL1Q13616 776 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 GBX1Q14549 363 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CCSMST1Q4G0I0 132 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ACSBG2Q5FVE4 666 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ARHGAP40Q5TG30 622 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 UNC5DQ6UXZ4 953 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TRIM73Q86UV7 250 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 DCUN1D3Q8IWE4 304 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FBXO36Q8NEA4 188 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 NKD1Q969G9 470 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 LRRC39Q96DD0 335 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CCNL2Q96S94 520 aaPredicted RBP13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 NDNQ99608 321 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CCDC68Q9H2F9 335 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PRORYQ9H606 182 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 LATS2Q9NRM7 1088 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 C1GALT1Q9NS00 363 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SOHLH2Q9NX45 425 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 GRHL1Q9NZI5 618 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PCDHB11Q9Y5F2 797 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ATMQ13315 3056 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 C2orf74A8MZ97 194 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 E7ESA3 106 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 MATN2O00339 956 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TIAF1O95411 115 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 C1orf105O95561 183 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 AHSGP02765 367 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 RPN2P04844 631 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PEBP1P30086 187 aaKnown RBP13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 BDKRB1P46663 353 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms