RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 MOGSQ13724 837 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 NR1D2Q14995 579 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 PIK3R6Q5UE93 754 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 TMEM214Q6NUQ4 689 aaKnown RBP13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 HDDC3Q8N4P3 179 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 PIK3C3Q8NEB9 887 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 VANGL1Q8TAA9 524 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 CYB5D2Q8WUJ1 264 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 VMP1Q96GC9 406 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 DEPDC7Q96QD5 511 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 CGREF1Q99674 301 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 RAB11FIP5Q9BXF6 653 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 EQTNQ9NQ60 294 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 NENFQ9UMX5 172 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 POLR1DQ9Y2S0 133 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 COL16A1Q07092 1604 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZNF840PA6NDX5 716 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 LEFTY2O00292 366 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 DBTP11182 482 aaKnown RBP13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 VARSP26640 1264 aaKnown RBP13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 FOXM1Q08050 763 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 ITGADQ13349 1161 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 PRR23BQ6ZRT6 265 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 MS4A4AQ96JQ5 239 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 C12orf66Q96MD2 445 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 PLEKHG4BQ96PX9 1271 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 PCDH7O60245 1069 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 TGFBIQ15582 683 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 PM20D1Q6GTS8 502 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 KBTBD2Q8IY47 623 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 NPWQ8N729 165 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 OR4F6Q8NGB9 312 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 BPIFB1Q8TDL5 484 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 RANBP9Q96S59 729 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 CCM2Q9BSQ5 444 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 EBF3Q9H4W6 596 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 TLR9Q9NR96 1032 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 RNF186Q9NXI6 227 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 DNAJB9Q9UBS3 223 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 RAPGEFL1Q9UHV5 662 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 ANGPTL1O95841 491 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 FSHRP23945 695 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 PTPN5P54829 565 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 TRIM32Q13049 653 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 LY6G5CQ5SRR4 150 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZNF678Q5SXM1 525 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 ARHGAP22Q7Z5H3 698 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 NXPE1Q8N323 547 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 OTUB2Q96DC9 234 aa13.95□□□□□ -0.18
PCDHGA11-201ENST00000398587 FADS2P1A8MWK0 482 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 E7ENX8 843 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 RPL4P36578 427 aaKnown RBP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 STXBP1P61764 594 aaKnown RBP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 NEK10Q6ZWH5 1172 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 TMEM130Q8N3G9 435 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 EBF2Q9HAK2 575 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 MAGEE1Q9HCI5 957 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 RASSF1Q9NS23 344 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 TJP1Q07157 1748 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 NWD2Q9ULI1 1742 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 A0A1B0GW55 424 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 PGLSO95336 258 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 RB1P06400 928 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 DUX4L2P0CJ85 424 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 DUX4L3P0CJ86 424 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 DUX4L4P0CJ87 422 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 DUX4L5P0CJ88 424 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 DUX4L6P0CJ89 424 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 DUX4L7P0CJ90 424 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 TEAD2Q15562 447 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 RNF220Q5VTB9 566 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 MMAAQ8IVH4 418 aaKnown RBP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 FAM81AQ8TBF8 368 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 NSUN3Q9H649 340 aaKnown RBP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 WDR26Q9H7D7 661 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 EVA1BQ9NVM1 165 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 DUX4Q9UBX2 424 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 B4GALT6Q9UBX8 382 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 SLC22A14Q9Y267 594 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 TSC22D4Q9Y3Q8 395 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 PRRC2BQ5JSZ5 2229 aaKnown RBP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 A0A1W2PP18 115 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 DPPA5A6NC42 116 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 RGS10O43665 173 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 FYNP06241 537 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 TPP2P29144 1249 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 MAT2AP31153 395 aaKnown RBP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 RPS6KA3P51812 740 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 PRR5P85299 388 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 SLBPQ14493 270 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 SEMA3AQ14563 771 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 ANGPT1Q15389 498 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 MED22Q15528 200 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 IFI44LQ53G44 452 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 RTP2Q5QGT7 225 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 GPR135Q8IZ08 494 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 POMGNT2Q8NAT1 580 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 CANT1Q8WVQ1 401 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZBED6CLQ96FA7 236 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms