RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 MUS81Q96NY9 551 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 TCF25Q9BQ70 676 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 KCTD5Q9NXV2 234 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 UTS2RQ9UKP6 389 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 CDC14AQ9UNH5 594 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 DMTF1Q9Y222 760 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 COQ6Q9Y2Z9 468 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 PRKAB1Q9Y478 270 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 ELOVL7A1L3X0 281 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 G3V2T6 193 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 FGF18O76093 207 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 SERPINA1P01009 418 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 PDYNP01213 254 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 GPIP06744 558 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 POLR2EP19388 210 aaKnown RBP10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 HLA-FP30511 346 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 DGCR6Q14129 220 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 LY6G5CQ5SRR4 150 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 SULT1C3Q6IMI6 304 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 CRTC3Q6UUV7 619 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 GPR180Q86V85 440 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 PHYKPLQ8IUZ5 450 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 ACDQ96AP0 544 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 MYOCQ99972 504 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 CERS4Q9HA82 394 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 ITM2BQ9Y287 266 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 BACE2Q9Y5Z0 518 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 PLK4O00444 970 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 MANBAO00462 879 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 F11P03951 625 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 SRCP12931 536 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 CYP2A7P20853 494 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 TACR1P25103 407 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 CCR7P32248 378 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 SOAT1P35610 550 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 SUOXP51687 545 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 ST8SIA6P61647 398 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 RPS14P62263 151 aaKnown RBP10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 EMX2Q04743 252 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 ACSM2AQ08AH3 577 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 LRRC74AQ0VAA2 488 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 ACSM2BQ68CK6 577 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 ZFAND4Q86XD8 727 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 RIOK2Q9BVS4 552 aaKnown RBP10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 SLC46A2Q9BY10 475 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 FAM83DQ9H4H8 585 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 C1orf109Q9NX04 203 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 ZIM2Q9NZV7 527 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 PHF24Q9UPV7 400 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 SNX5Q9Y5X3 404 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 RALGAPA2Q2PPJ7 1873 aa10.21□□□□□ -0.78
CPSF1P1-201ENST00000397477 SLC28A1O00337 649 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 CXCR6O00574 342 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 TAPBPO15533 448 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 HNF4AP41235 474 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 ADARP55265 1226 aaKnown RBP10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 PHEXP78562 749 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 C22orf39Q6P5X5 142 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 TBPL2Q6SJ96 375 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 TMEM26Q6ZUK4 368 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 KCTD8Q6ZWB6 473 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 VRK3Q8IV63 474 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 ATG16L2Q8NAA4 619 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 TOP1MTQ969P6 601 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 MYRFLQ96LU7 910 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 ZNF597Q96LX8 424 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 INPP5KQ9BT40 448 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 MAGEL2Q9UJ55 1249 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 DLGAP4Q9Y2H0 992 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 TDRKHQ9Y2W6 561 aaKnown RBP10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 ASPDHA6ND91 283 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 PITPNM1O00562 1244 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 LZTS3O60299 673 aaPredicted RBP10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 EEDO75530 441 aaKnown RBP10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 MYO1DO94832 1006 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 MATN4O95460 622 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 BCKDHAP12694 445 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 HLA-EP13747 358 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 RFC2P35250 354 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 CLCN4P51793 760 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 PWP1Q13610 501 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 PPP4R4Q6NUP7 873 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 ADCK2Q7Z695 626 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 GALNT7Q86SF2 657 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 HORMAD1Q86X24 394 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 CHERPQ8IWX8 916 aaKnown RBP10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 LILRA3Q8N6C8 439 aaPredicted RBP10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 DPH2Q9BQC3 489 aaPredicted RBP10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 UGT2B28Q9BY64 529 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 PAIP1Q9H074 479 aaKnown RBP10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 CWH43Q9H720 699 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 CXorf21Q9HAI6 301 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 RASSF1Q9NS23 344 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 EBF1Q9UH73 591 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 MBD1Q9UIS9 605 aaPredicted RBP10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 INTS6Q9UL03 887 aaKnown RBP10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 SNX6Q9UNH7 406 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 PCDHA9Q9Y5H5 950 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 ZSWIM8A7E2V4 1837 aa10.2□□□□□ -0.78
CPSF1P1-201ENST00000397477 MGAT4DA6NG13 374 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms