RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SHMT2P34897 504 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 TIAL1Q01085 375 aaKnown RBP eCLIP20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 PRKAA1Q13131 559 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 TEX35Q5T0J7 233 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 HECTD2Q5U5R9 776 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 FAM45BPQ6NSW5 357 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 UGT3A1Q6NUS8 523 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 ZC3HC1Q86WB0 502 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 IFT20Q8IY31 132 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 FAM45AQ8TCE6 357 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 CIDEBQ9UHD4 219 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 ACACAQ13085 2346 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 MAP1BP46821 2468 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 GSAPA4D1B5 854 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 BTN3A3O00478 584 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 C1orf105O95561 183 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 ANKRD34CP0C6C1 535 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 TPBGLP0DKB5 382 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 ENO3P13929 434 aaPredicted RBP20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 CACHD1Q5VU97 1274 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 CYS1Q717R9 158 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 PRSS42Q7Z5A4 293 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 CTAGE3PQ8IX95 158 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 FBF1Q8TES7 1133 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 ZCCHC14Q8WYQ9 949 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 ELMO2Q96JJ3 720 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 TSPYL1Q9H0U9 437 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 NINJ2Q9NZG7 142 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 TXNDC16Q9P2K2 825 aa20.56■□□□□ 0.88
TSPAN4-206ENST00000397408 TMEM8BA6NDV4 472 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 DXOO77932 396 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 TNFSF15O95150 251 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 MATN4O95460 622 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 C1QAP02745 245 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 CBSLP0DN79 551 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 CCL4P13236 92 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 FDXRP22570 491 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 RBMS1P29558 406 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 PKLRP30613 574 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 CBSP35520 551 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 ETV5P41161 510 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 SEPHS1P49903 392 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 KPNA2P52292 529 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 KYNUQ16719 465 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 KBTBD12Q3ZCT8 623 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 TTC23LQ6PF05 361 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 NEK10Q6ZWH5 1172 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 FAM129CQ86XR2 697 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 ADGRF3Q8IZF5 1079 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 LSMEM2Q8N112 164 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 CD180Q99467 661 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 OLFM1Q99784 485 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 RHOJQ9H4E5 214 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 ZNF768Q9H5H4 540 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 ASCL3Q9NQ33 180 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 DKK4Q9UBT3 224 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 POMT2Q9UKY4 750 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 NFU1Q9UMS0 254 aa20.55■□□□□ 0.88
TSPAN4-206ENST00000397408 FAM95CA0A1B0GW59 222 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 TLCD2A6NGC4 264 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 EFCAB7A8K855 629 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 MATN2O00339 956 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 TOX3O15405 576 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 CAPNS1P04632 268 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 ITGA2BP08514 1039 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 MPC1LP0DKB6 136 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 CCNFP41002 786 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 SKIV2L2P42285 1042 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 RAB28P51157 221 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 MAPK10P53779 464 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 PDAP1Q13442 181 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 GRB7Q14451 532 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 CCSMST1Q4G0I0 132 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 PAQR3Q6TCH7 311 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 IGF2-ASQ6U949 168 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 PIWIL4Q7Z3Z4 852 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 RELL1Q8IUW5 271 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 RAD51AP1Q96B01 352 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 VPS39Q96JC1 886 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 SLC46A1Q96NT5 459 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 IL17FQ96PD4 163 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 MAP3K3Q99759 626 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 CDC42EP4Q9H3Q1 356 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 OCIAD1Q9NX40 245 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 VWA7Q9Y334 891 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 WDFY3Q8IZQ1 3526 aa20.54■□□□□ 0.88
TSPAN4-206ENST00000397408 KRT87PA6NCN2 255 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 ARHGEF33A8MVX0 844 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 EIF3FO00303 357 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 FGF3P11487 239 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 SAT1P21673 171 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 CD9P21926 228 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 GP5P40197 560 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 MLLT3P42568 568 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 RGS4P49798 205 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 PGGT1BP53609 377 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 EFTUD2Q15029 972 aaKnown RBP eCLIP20.53■□□□□ 0.882e-6■■■□□ 19.1
TSPAN4-206ENST00000397408 TBC1D25Q3MII6 688 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 UBAP2Q5T6F2 1119 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 PPM1NQ8N819 430 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms