RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 IDUAP35475 653 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 OPRL1P41146 370 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 GNPDA1P46926 289 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 PHC1P78364 1004 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 SLC44A4Q53GD3 710 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 FAM151BQ6UXP7 276 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 GCNT7Q6ZNI0 430 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 SERPINA9Q86WD7 417 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 ADHFE1Q8IWW8 467 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 RGL4Q8IZJ4 473 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 NETO1Q8TDF5 533 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 CDK5RAP1Q96SZ6 601 aaKnown RBP15.38■□□□□ 0.05
HOXA3-202ENST00000396352 TNKS2Q9H2K2 1166 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 HCSTQ9UBK5 93 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 C3orf18Q9UK00 162 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 GABRQQ9UN88 632 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 PCDHB14Q9Y5E9 798 aa15.38■□□□□ 0.05
HOXA3-202ENST00000396352 FAM220BPB1ANY3 271 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 STC2O76061 302 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 CTPS1P17812 591 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 RPS3P23396 243 aaKnown RBP eCLIP15.37■□□□□ 0.05
HOXA3-202ENST00000396352 CBX3Q13185 183 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 TOP3AQ13472 1001 aaPredicted RBP15.37■□□□□ 0.05
HOXA3-202ENST00000396352 RGS21Q2M5E4 152 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 USP39Q53GS9 565 aaKnown RBP15.37■□□□□ 0.05
HOXA3-202ENST00000396352 LDLRAP1Q5SW96 308 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 GRAMD4Q6IC98 578 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 CERS6Q6ZMG9 384 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 ANKRD13BQ86YJ7 626 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 DCP2Q8IU60 420 aaKnown RBP15.37■□□□□ 0.05
HOXA3-202ENST00000396352 EID3Q8N140 333 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 TTC16Q8NEE8 873 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 OR52E6Q96RD3 313 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 NODALQ96S42 347 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 SH3GL1Q99961 368 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 APOL5Q9BWW9 433 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 FAM126AQ9BYI3 521 aaPredicted RBP15.37■□□□□ 0.05
HOXA3-202ENST00000396352 NACA2Q9H009 215 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 CLPBQ9H078 707 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 LRTM1Q9HBL6 345 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 SERHLQ9NQF3 203 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 OPTCQ9UBM4 332 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 ZNF490Q9ULM2 529 aaPredicted RBP15.37■□□□□ 0.05
HOXA3-202ENST00000396352 SLC16A6O15403 523 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 PRAMEF1O95521 474 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 SERPINA1P01009 418 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 HOXB9P17482 250 aaPredicted RBP15.37■□□□□ 0.05
HOXA3-202ENST00000396352 CACHD1Q5VU97 1274 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 ATG9BQ674R7 924 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 BTLAQ7Z6A9 289 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 CLDN19Q8N6F1 224 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 CLHC1Q8NHS4 586 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 UBTD2Q8WUN7 234 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 WBP2Q969T9 261 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 CPPED1Q9BRF8 314 aaPredicted RBP15.37■□□□□ 0.05
HOXA3-202ENST00000396352 GPR63Q9BZJ6 419 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 ARHGAP39Q9C0H5 1083 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 GKN1Q9NS71 199 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 VNN3Q9NY84 501 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 SELENONQ9NZV5 590 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 MANBAO00462 879 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 ULK1O75385 1050 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 SEC22BO75396 215 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 RYKP34925 604 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 HUNKP57058 714 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 NIPAL1Q6NVV3 410 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 PIWIL3Q7Z3Z3 882 aaKnown RBP15.37■□□□□ 0.05
HOXA3-202ENST00000396352 IFNL1Q8IU54 200 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 USP7Q93009 1102 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 NCLNQ969V3 563 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 ZNF566Q969W8 418 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 CCDC138Q96M89 665 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 NTMT1Q9BV86 223 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 MAGEE1Q9HCI5 957 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 U3KQV3 271 aa15.37■□□□□ 0.05
HOXA3-202ENST00000396352 PIKFYVEQ9Y2I7 2098 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 MANSC4A6NHS7 340 aaPredicted RBP15.36■□□□□ 0.05
HOXA3-202ENST00000396352 GOLGA8CPA6NN73 597 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 ARVCFO00192 962 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 UGT2B11O75310 529 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 SERPINB7O75635 380 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 DNAJB5O75953 348 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 WDR47O94967 919 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 ZNF7P17097 686 aaPredicted RBP15.36■□□□□ 0.05
HOXA3-202ENST00000396352 IL1RNP18510 177 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 SFSWAPQ12872 951 aaKnown RBP15.36■□□□□ 0.05
HOXA3-202ENST00000396352 ITGADQ13349 1161 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 SGO1Q5FBB7 561 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 FAM43BQ6ZT52 329 aaPredicted RBP15.36■□□□□ 0.05
HOXA3-202ENST00000396352 PARP8Q8N3A8 854 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 CNIH3Q8TBE1 160 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 SH3YL1Q96HL8 342 aaPredicted RBP15.36■□□□□ 0.05
HOXA3-202ENST00000396352 ZNF347Q96SE7 839 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 EGFL8Q99944 293 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 NEURL2Q9BR09 285 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 WWOXQ9NZC7 414 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 TRPS1Q9UHF7 1281 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 ANGPTL3Q9Y5C1 460 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 ZNF840PA6NDX5 716 aa15.36■□□□□ 0.05
HOXA3-202ENST00000396352 LOC730098B7Z3J9 87 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms