RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TMEM74Q96NL1 305 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 PAFAH2Q99487 392 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 NRTNQ99748 197 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 SCNM1Q9BWG6 230 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 PARD6BQ9BYG5 372 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 SEMA6CQ9H3T2 930 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 XKR8Q9H6D3 395 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 CAB39LQ9H9S4 337 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 HRASLS2Q9NWW9 162 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 TMEM9Q9P0T7 183 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 PLAGL1Q9UM63 463 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 ICKQ9UPZ9 632 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 IKBKGQ9Y6K9 419 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 NCOR2Q9Y618 2525 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 SPEGQ15772 3267 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 IGHV5-10-1A0A0J9YXX1 117 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 FAM221BA6H8Z2 402 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 OR5K3A6NET4 321 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 POC1B-GALNT4F8VUJ3 575 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 CATP04040 527 aaKnown RBP18.64■□□□□ 0.57
HOXA9-202ENST00000396345 INHBAP08476 426 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 TPBGLP0DKB5 382 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 MPSTP25325 297 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 SHMT2P34897 504 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 MSH2P43246 934 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 ZFP36L1Q07352 338 aaKnown RBP18.64■□□□□ 0.57
HOXA9-202ENST00000396345 SLC29A2Q14542 456 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 ZNF460Q14592 562 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 PHF19Q5T6S3 580 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 ARMC6Q6NXE6 501 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 IRGCQ6NXR0 463 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 SLITRK4Q8IW52 837 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 UBLCP1Q8WVY7 318 aaPredicted RBP18.64■□□□□ 0.57
HOXA9-202ENST00000396345 ASB11Q8WXH4 323 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 RAD51AP1Q96B01 352 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 GRAMD1AQ96CP6 724 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 RAB33BQ9H082 229 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 EPB41L4BQ9H329 900 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 POPDC3Q9HBV1 291 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 SYTL2Q9HCH5 934 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 EPHA6Q9UF33 1036 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 CIDEBQ9UHD4 219 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 ENTPD2Q9Y5L3 495 aa18.64■□□□□ 0.57
HOXA9-202ENST00000396345 EXOC1LA0A1B0GW35 172 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 ARHGEF33A8MVX0 844 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 CAPN5O15484 640 aaPredicted RBP18.63■□□□□ 0.57
HOXA9-202ENST00000396345 TSPAN12O95859 305 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 STMN1P16949 149 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 ZNF37AP17032 561 aaPredicted RBP18.63■□□□□ 0.57
HOXA9-202ENST00000396345 POLR2CP19387 275 aaPredicted RBP18.63■□□□□ 0.57
HOXA9-202ENST00000396345 CCKBRP32239 447 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 GFERP55789 205 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 PRKAA1Q13131 559 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 GRB7Q14451 532 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 CCSMST1Q4G0I0 132 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 SNAP47Q5SQN1 464 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 MROH9Q5TGP6 573 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 TMEM207Q6UWW9 146 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 NKAPQ8N5F7 415 aaKnown RBP18.63■□□□□ 0.57
HOXA9-202ENST00000396345 ZDHHC12Q96GR4 267 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 CCDC74BQ96LY2 380 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 TGM7Q96PF1 710 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 STRADBQ9C0K7 418 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 GPAMQ9HCL2 828 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 RRAGDQ9NQL2 400 aaPredicted RBP18.63■□□□□ 0.57
HOXA9-202ENST00000396345 PDP2Q9P2J9 529 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 KLHL3Q9UH77 587 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 NEUROG3Q9Y4Z2 214 aa18.63■□□□□ 0.57
HOXA9-202ENST00000396345 MN1Q10571 1320 aaPredicted RBP18.63■□□□□ 0.57
HOXA9-202ENST00000396345 GFYI3L273 518 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 BTN3A3O00478 584 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 PHGDHO43175 533 aaKnown RBP18.62■□□□□ 0.57
HOXA9-202ENST00000396345 ZBTB14O43829 449 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 C9P02748 559 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 THRAP10827 490 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 MAP4P27816 1152 aaKnown RBP18.62■□□□□ 0.57
HOXA9-202ENST00000396345 PKLRP30613 574 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 SERPINB9P50453 376 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 RAB28P51157 221 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 RAB10P61026 200 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 TRA2AQ13595 282 aaKnown RBP eCLIP18.62■□□□□ 0.57
HOXA9-202ENST00000396345 BMPR2Q13873 1038 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 NAA30Q147X3 362 aaPredicted RBP18.62■□□□□ 0.57
HOXA9-202ENST00000396345 UBE2R2Q712K3 238 aaPredicted RBP18.62■□□□□ 0.57
HOXA9-202ENST00000396345 RASGRP3Q8IV61 690 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 ADGRF3Q8IZF5 1079 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 AENQ8WTP8 325 aaKnown RBP18.62■□□□□ 0.57
HOXA9-202ENST00000396345 PDLIM5Q96HC4 596 aaKnown RBP18.62■□□□□ 0.57
HOXA9-202ENST00000396345 OR6C2Q9NZP2 312 aa18.62■□□□□ 0.57
HOXA9-202ENST00000396345 GSAPA4D1B5 854 aa18.61■□□□□ 0.57
HOXA9-202ENST00000396345 MATN2O00339 956 aa18.61■□□□□ 0.57
HOXA9-202ENST00000396345 BTN3A1O00481 513 aa18.61■□□□□ 0.57
HOXA9-202ENST00000396345 RASGRF2O14827 1237 aa18.61■□□□□ 0.57
HOXA9-202ENST00000396345 SLC16A5O15375 505 aa18.61■□□□□ 0.57
HOXA9-202ENST00000396345 C8GP07360 202 aa18.61■□□□□ 0.57
HOXA9-202ENST00000396345 TUBBP07437 444 aa18.61■□□□□ 0.57
HOXA9-202ENST00000396345 PPP1CAP62136 330 aa18.61■□□□□ 0.57
HOXA9-202ENST00000396345 ZKSCAN8Q15776 578 aaPredicted RBP18.61■□□□□ 0.57
HOXA9-202ENST00000396345 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.61■□□□□ 0.57
HOXA9-202ENST00000396345 EMBQ6PCB8 327 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms