RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 GTF2H4Q92759 462 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 MRGPRX3Q96LB0 322 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 PPM1MQ96MI6 270 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 DPY30Q9C005 99 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 LINC00597Q9H2U6 94 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 SAC3D1A6NKF1 404 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 DLGAP1O14490 977 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 ACOX3O15254 700 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 SEC22BO75396 215 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 RFPL2O75678 378 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 RASAL1O95294 804 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 PGM3O95394 542 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 AP1S2P56377 157 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 BOP1Q14137 746 aaKnown RBP16.4■□□□□ 0.22
NUP50-202ENST00000396096 SELPLGQ14242 412 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 SLC5A9Q2M3M2 681 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 PLPP4Q5VZY2 271 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 IYDQ6PHW0 289 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 LIX1Q8N485 282 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 ZFAND2BQ8WV99 257 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 NSMCE2Q96MF7 247 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 PRPF18Q99633 342 aaKnown RBP16.4■□□□□ 0.22
NUP50-202ENST00000396096 FAM83CQ9BQN1 747 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 BEGAINQ9BUH8 593 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 ABCG8Q9H221 673 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 FAM83DQ9H4H8 585 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 ACTR8Q9H981 624 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 PNPLA3Q9NST1 481 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 USP22Q9UPT9 525 aa16.4■□□□□ 0.22
NUP50-202ENST00000396096 CFAP99D6REC4 459 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 SGTAO43765 313 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 HIST1H2AGP0C0S8 130 aaPredicted RBP16.39■□□□□ 0.22
NUP50-202ENST00000396096 CDH1P12830 882 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 POLR2EP19388 210 aaKnown RBP16.39■□□□□ 0.22
NUP50-202ENST00000396096 GGT1P19440 569 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 HIST1H2ADP20671 130 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 NFKBIAP25963 317 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 HSPA14Q0VDF9 509 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 AAK1Q2M2I8 961 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 LRRC73Q5JTD7 316 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 PRSS36Q5K4E3 855 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 GLYATQ6IB77 296 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 SUSD1Q6UWL2 747 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 HSD11B1LQ7Z5J1 315 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 VRK3Q8IV63 474 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 TRAM1L1Q8N609 369 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 DDHD1Q8NEL9 900 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 DNAJB8Q8NHS0 232 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 BPIFB1Q8TDL5 484 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 HCAR2Q8TDS4 363 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 OSCP1Q8WVF1 389 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 TIFAQ96CG3 184 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 HIST1H2AHQ96KK5 128 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 MAGEB10Q96LZ2 347 aaPredicted RBP16.39■□□□□ 0.22
NUP50-202ENST00000396096 HIST1H2AJQ99878 128 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 H2AFJQ9BTM1 129 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 ACPTQ9BZG2 426 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 PAPOLBQ9NRJ5 636 aaKnown RBP16.39■□□□□ 0.22
NUP50-202ENST00000396096 CD84Q9UIB8 345 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 ZNF639Q9UID6 485 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 SNX6Q9UNH7 406 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 AP3M1Q9Y2T2 418 aa16.39■□□□□ 0.22
NUP50-202ENST00000396096 FAM149AA5PLN7 773 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 UPK3BL1B0FP48 263 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 UPK3BL2E5RIL1 263 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 TULP3O75386 442 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 PDYNP01213 254 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 ACPPP15309 386 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 TIMP2P16035 220 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 CYP2A7P20853 494 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 BMPR1AP36894 532 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 MTPNP58546 118 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 FAM174BQ3ZCQ3 159 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 SGO1Q5FBB7 561 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 SLC30A9Q6PML9 568 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 RALGPS2Q86X27 583 aaPredicted RBP16.39■□□□□ 0.21
NUP50-202ENST00000396096 RIMKLAQ8IXN7 391 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 FAM9CQ8IZT9 166 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 DTWD1Q8N5C7 304 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 NUDT8Q8WV74 236 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 LRIG1Q96JA1 1093 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 ZNF583Q96ND8 569 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 VAPAQ9P0L0 249 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 DKK3Q9UBP4 350 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 FBXO10Q9UK96 956 aa16.39■□□□□ 0.21
NUP50-202ENST00000396096 ENO4A6NNW6 628 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 H3BNH8 94 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 DFNA5O60443 496 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 TPST1O60507 370 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 LEFTY1O75610 366 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 H6PDO95479 791 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 FGBP02675 491 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 PGRP06401 933 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 ANXA6P08133 673 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 HNRNPA1P09651 372 aaKnown RBP eCLIP16.38■□□□□ 0.21
NUP50-202ENST00000396096 PRPS2P11908 318 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 BCKDHAP12694 445 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 GSTT1P30711 240 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 MAPKAPK3Q16644 382 aa16.38■□□□□ 0.21
NUP50-202ENST00000396096 HENMT1Q5T8I9 393 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms