RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 GRASPQ7Z6J2 395 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RBM12BQ8IXT5 1001 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ARNTL2Q8WYA1 636 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 NUS1Q96E22 293 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 P2RY13Q9BPV8 354 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MVB12BQ9H7P6 319 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 C10orf88Q9H8K7 445 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RAB26Q9ULW5 256 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 VPS4AQ9UN37 437 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 G3BP2Q9UN86 482 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 POMPQ9Y244 141 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ENTPD2Q9Y5L3 495 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 HHLA1C9JL84 531 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 HOXC11O43248 304 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RSL1D1O76021 490 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 KAT7O95251 611 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MATN4O95460 622 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 OLFM2O95897 454 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 NTSR1P30989 418 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PTDSS1P48651 473 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RUNX3Q13761 415 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 NCEH1Q6PIU2 408 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 IKBIPQ70UQ0 350 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 GET4Q7L5D6 327 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RBM4BQ9BQ04 359 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RBM4Q9BWF3 364 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TRIM4Q9C037 500 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 NOL11Q9H8H0 719 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 FANCEQ9HB96 536 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CACNA2D2Q9NY47 1150 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 FKBPLQ9UIM3 349 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 FREM3P0C091 2139 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 IRGMA1A4Y4 181 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PEX1O43933 1283 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 F11P03951 625 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 AKT2P31751 481 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 DGKEP52429 567 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM115Q12893 351 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MBOAT1Q6ZNC8 495 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 GPRIN1Q7Z2K8 1008 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MINDY1Q8N5J2 469 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 BTN2A2Q8WVV5 523 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MOAP1Q96BY2 351 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SLC45A3Q96JT2 553 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CAMK1GQ96NX5 476 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 NSUN3Q9H649 340 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TMLHEQ9NVH6 421 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 EURLQ9NYK6 297 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF780BQ9Y6R6 833 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PRSS51A0A1B0GVH4 220 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SLITRK5O94991 958 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MPC1LP0DKB6 136 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TCF3P15923 654 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SHMT2P34897 504 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 GRIA3P42263 894 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ELF3P78545 371 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 QPCTQ16769 361 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF621Q6ZSS3 439 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RABEPKQ7Z6M1 372 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ISCA2Q86U28 154 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TMIEQ8NEW7 156 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CMTM7Q96FZ5 175 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CENPNQ96H22 339 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 BBS4Q96RK4 519 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CDH22Q9UJ99 828 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 S1PR4O95977 384 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CAPN1P07384 714 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ALPPL2P10696 532 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TSFMP43897 325 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ARCN1P48444 511 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CHIT1Q13231 466 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 NCF4Q15080 339 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SF1Q15637 639 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TRIM71Q2Q1W2 868 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PPM1JQ5JR12 505 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RBM23Q86U06 439 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 KIAA2013Q8IYS2 634 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CENPLQ8N0S6 344 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PDPRQ8NCN5 879 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SEC14L4Q9UDX3 406 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TEKT2Q9UIF3 430 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CDH7Q9ULB5 785 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MYRFQ9Y2G1 1151 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 C2orf71A6NGG8 1288 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MAGEB17A8MXT2 336 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 KRT36O76013 467 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ITGB1P05556 798 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 YPEL5P62699 121 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RPL38P63173 70 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF763Q0D2J5 394 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM63BQ5T3F8 832 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CYP20A1Q6UW02 462 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ZC3H7AQ8IWR0 971 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 GPR135Q8IZ08 494 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SYNPOQ8N3V7 929 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ATG16L2Q8NAA4 619 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 OR2T34Q8NGX1 318 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 OR2T3Q8NH03 318 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 EPB41L1Q9H4G0 881 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms