RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SNX32Q86XE0 403 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 CADM4Q8NFZ8 388 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 WDR60Q8WVS4 1066 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 NELL1Q92832 810 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 AP2M1Q96CW1 435 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 C3orf30Q96M34 536 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 C1QTNF7Q9BXJ2 289 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 C1QTNF2Q9BXJ5 285 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 CACNA1HO95180 2353 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 HRO43593 1189 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 SGTAO43765 313 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 ENTPD5O75356 428 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 UROSP10746 265 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 CD1EP15812 388 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 TTC23LQ6PF05 361 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 RNF165Q6ZSG1 346 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 FRA10AC1Q70Z53 315 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 ARMCX6Q7L4S7 300 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 LPCAT2Q7L5N7 544 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 SYVN1Q86TM6 617 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 THTPAQ9BU02 230 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 RIOK2Q9BVS4 552 aaKnown RBP14.77□□□□□ -0.04
SCAF11-204ENST00000395454 SPATA16Q9BXB7 569 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 DCLRE1BQ9H816 532 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 EBF2Q9HAK2 575 aa14.77□□□□□ -0.04
SCAF11-204ENST00000395454 SEMA4BQ9NPR2 832 aaPredicted RBP14.77□□□□□ -0.04
SCAF11-204ENST00000395454 EIF2B4Q9UI10 523 aaKnown RBP14.77□□□□□ -0.04
SCAF11-204ENST00000395454 PRPF19Q9UMS4 504 aaKnown RBP14.77□□□□□ -0.04
SCAF11-204ENST00000395454 LOC100653049A0A140TA62 436 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 METTL12A8MUP2 240 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 PIP5K1BO14986 540 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 KRT34O76011 436 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 PCCBP05166 539 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 ENO2P09104 434 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 ATP1B2P14415 290 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 EZRP15311 586 aaKnown RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 HNRNPA2B1P22626 353 aaKnown RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 CCR7P32248 378 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 CCR5P51681 352 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 ACTR3P61158 418 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 MXRA7P84157 204 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 CDKL1Q00532 357 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 KPNB1Q14974 876 aaKnown RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 WSCD2Q2TBF2 565 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 PLEKHS1Q5SXH7 462 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 RAET1GQ6H3X3 334 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 SULT1C3Q6IMI6 304 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 GPRIN3Q6ZVF9 776 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 NEK10Q6ZWH5 1172 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 CEP68Q76N32 757 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 C11orf74Q86VG3 221 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 ZBTB44Q8NCP5 570 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 DLG3Q92796 817 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 FOXJ1Q92949 421 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 HGH1Q9BTY7 390 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 PCED1AQ9H1Q7 454 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 ABCG8Q9H221 673 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 AKTIPQ9H8T0 292 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 NDE1Q9NXR1 346 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 UTP6Q9NYH9 597 aaKnown RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 ADAMTS6Q9UKP5 1117 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 FIS1Q9Y3D6 152 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 PCDHGA2Q9Y5H1 932 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 A0A1W2PPC4 97 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 NCF1BA6NI72 391 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 NCF1CA8MVU1 366 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 K7ESM1 405 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 QSOX1O00391 747 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 KPNA5O15131 536 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 MPC1LP0DKB6 136 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 NCF1P14598 390 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 VCLP18206 1134 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 ITGB6P18564 788 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 MAOBP27338 520 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 CNR2P34972 360 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 CUL3Q13618 768 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 AGERQ15109 404 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 MAPRE2Q15555 327 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 PHKG1Q16816 387 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 KHDC1Q4VXA5 237 aaKnown RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 ZNF765Q7L2R6 523 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 HOMEZQ8IX15 550 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 RGL4Q8IZJ4 473 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 KYQ8NBH2 561 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 NAT14Q8WUY8 206 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 KCNA7Q96RP8 456 aa14.76□□□□□ -0.05
SCAF11-204ENST00000395454 DUSP15Q9H1R2 295 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 MBNL1Q9NR56 388 aaKnown RBP14.76□□□□□ -0.05
SCAF11-204ENST00000395454 FADS2P1A8MWK0 482 aa14.75□□□□□ -0.05
SCAF11-204ENST00000395454 C10orf142B7Z368 130 aa14.75□□□□□ -0.05
SCAF11-204ENST00000395454 CFAP99D6REC4 459 aa14.75□□□□□ -0.05
SCAF11-204ENST00000395454 TAPBPO15533 448 aa14.75□□□□□ -0.05
SCAF11-204ENST00000395454 ALDOCP09972 364 aaKnown RBP14.75□□□□□ -0.05
SCAF11-204ENST00000395454 PRDX3P30048 256 aaKnown RBP14.75□□□□□ -0.05
SCAF11-204ENST00000395454 GGT5P36269 586 aa14.75□□□□□ -0.05
SCAF11-204ENST00000395454 GPR1P46091 355 aa14.75□□□□□ -0.05
SCAF11-204ENST00000395454 CCNG1P51959 295 aa14.75□□□□□ -0.05
SCAF11-204ENST00000395454 MTTPP55157 894 aa14.75□□□□□ -0.05
SCAF11-204ENST00000395454 DPTQ07507 201 aa14.75□□□□□ -0.05
SCAF11-204ENST00000395454 SP140Q13342 867 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms