RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SHHQ15465 462 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 TYSND1Q2T9J0 566 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 GPR33Q49SQ1 333 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 FAM78AQ5JUQ0 283 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 SDE2Q6IQ49 451 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 VITQ6UXI7 678 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 OR2T11Q8NH01 316 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 RHEBL1Q8TAI7 183 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 MEAF6Q9HAF1 191 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 DNAJC11Q9NVH1 559 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 MSRAQ9UJ68 235 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 PDE10AQ9Y233 779 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 DYRK1BQ9Y463 629 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 ZDBF2Q9HCK1 2354 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 PRRT4C9JH25 899 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 POP7O75817 140 aaKnown RBP15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 CYP17A1P05093 508 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 VARSP26640 1264 aaKnown RBP15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 YAP1P46937 504 aaKnown RBP15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 RFX3P48380 749 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 CLCN4P51793 760 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 PRKAG1P54619 331 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 TMEM215Q68D42 235 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 ISL2Q96A47 359 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 TUBGCP5Q96RT8 1024 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 P2RY13Q9BPV8 354 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 MYO10Q9HD67 2058 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 MAGEA13PA6NCF6 341 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 H3BQ06 376 aaPredicted RBP15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 SOCS5O75159 536 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 MRPS35P82673 323 aaKnown RBP15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 SPIDRQ14159 915 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 ATAT1Q5SQI0 421 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 TANGO2Q6ICL3 276 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 SULT1C3Q6IMI6 304 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 ZCCHC8Q6NZY4 707 aaKnown RBP15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 TMC8Q8IU68 726 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 CBR4Q8N4T8 237 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 FAM110BQ8TC76 370 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 NDRG2Q9UN36 371 aaKnown RBP15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 SNX6Q9UNH7 406 aa15.54■□□□□ 0.08
SMARCD1-202ENST00000394963 RFXANKO14593 260 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 DFNA5O60443 496 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 CLCN7P51798 805 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 ERVK-8P63133 956 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 SATB1Q01826 763 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 NFE2L1Q14494 772 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 SWT1Q5T5J6 900 aaKnown RBP15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 OR4F3Q6IEY1 312 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 LARP4Q71RC2 724 aaKnown RBP eCLIP15.53■□□□□ 0.082e-8■□□□□ 9.3
SMARCD1-202ENST00000394963 PHYKPLQ8IUZ5 450 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 CHFRQ96EP1 664 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 PPP3R2Q96LZ3 170 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 CD244Q9BZW8 370 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 C1orf21Q9H246 121 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 OR51B5Q9H339 312 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 XKR8Q9H6D3 395 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 KCNE2Q9Y6J6 123 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 KCNH1O95259 989 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 SLC16A8O95907 504 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 PRNPP04156 253 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 C1SP09871 688 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 VIPR1P32241 457 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 MNX1P50219 401 aaPredicted RBP15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 SPDYE7PQ495Y7 208 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 PARS2Q7L3T8 475 aaKnown RBP15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 GPR180Q86V85 440 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 CCDC138Q96M89 665 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 CCT7Q99832 543 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 GSK3BP49841 420 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 HKDC1Q2TB90 917 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 ZNF805Q5CZA5 627 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 WLSQ5T9L3 541 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 BRAT1Q6PJG6 821 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 SPESP1Q6UW49 350 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 ZNF513Q8N8E2 541 aaPredicted RBP15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 GPR150Q8NGU9 434 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 PBX4Q9BYU1 374 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 MED16Q9Y2X0 877 aa15.53■□□□□ 0.08
SMARCD1-202ENST00000394963 VWA8A3KMH1 1905 aa15.52■□□□□ 0.08
SMARCD1-202ENST00000394963 IGLON5A6NGN9 336 aa15.52■□□□□ 0.08
SMARCD1-202ENST00000394963 PDYNP01213 254 aa15.52■□□□□ 0.08
SMARCD1-202ENST00000394963 GNAZP19086 355 aa15.52■□□□□ 0.08
SMARCD1-202ENST00000394963 DUS1LQ6P1R4 473 aaKnown RBP15.52■□□□□ 0.08
SMARCD1-202ENST00000394963 METTL3Q86U44 580 aaKnown RBP15.52■□□□□ 0.08
SMARCD1-202ENST00000394963 LRRC3BQ96PB8 259 aa15.52■□□□□ 0.08
SMARCD1-202ENST00000394963 NRTNQ99748 197 aa15.52■□□□□ 0.08
SMARCD1-202ENST00000394963 VCANP13611 3396 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 E2F3O00716 465 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 MAP3K13O43283 966 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 PTGER1P34995 402 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 GK3PQ14409 553 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 CYP27C1Q4G0S4 372 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 FUNDC1Q8IVP5 155 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 SLC15A3Q8IY34 581 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 OR2T12Q8NG77 320 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 CSGALNACT1Q8TDX6 532 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 MIEF1Q9NQG6 463 aa15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 WARS2Q9UGM6 360 aaKnown RBP15.52■□□□□ 0.07
SMARCD1-202ENST00000394963 RAPGEFL1Q9UHV5 662 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms