RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 E7ESA3 106 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 C1QTNF3-AMACRE9PGA6 284 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 LEFTY2O00292 366 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 PLD2O14939 933 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 PER2O15055 1255 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 TGM5O43548 720 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 ATP6AP2O75787 350 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 STC2O76061 302 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 RECQL5O94762 991 aaPredicted RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 PGLSO95336 258 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 TOP3BO95985 862 aaKnown RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 CNPP09543 421 aaKnown RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 TFEBP19484 476 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 RPL10P27635 214 aaKnown RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 MPP1Q00013 466 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 CAP1Q01518 475 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 RAB30Q15771 203 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 CCDC58Q4VC31 144 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 SETMARQ53H47 684 aaPredicted RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 SIGIRRQ6IA17 410 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 FSTL4Q6MZW2 842 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 BPHLQ86WA6 291 aaPredicted RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 GPSM1Q86YR5 675 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 TICAM1Q8IUC6 712 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 CPA6Q8N4T0 437 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 SNX19Q92543 992 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 TMCO6Q96DC7 493 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 SH3YL1Q96HL8 342 aaPredicted RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 RPL10LQ96L21 214 aaKnown RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 OR52B2Q96RD2 323 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 CLSTN3Q9BQT9 956 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 NAA50Q9GZZ1 169 aaKnown RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 TRIT1Q9H3H1 467 aaKnown RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 POMKQ9H5K3 350 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 ALG9Q9H6U8 611 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 KAT8Q9H7Z6 458 aaKnown RBP5.59□□□□□ -1.51
RFFL-202ENST00000394597 MAT2BQ9NZL9 334 aa5.59□□□□□ -1.51
RFFL-202ENST00000394597 MAFKO60675 156 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 ABCB7O75027 752 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 ARHGEF15O94989 841 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 ACADMP11310 421 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 IGFBP6P24592 240 aaPredicted RBP5.59□□□□□ -1.52
RFFL-202ENST00000394597 GRK3P35626 688 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 HNF4AP41235 474 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 ATP6V0D1P61421 351 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 SGCGQ13326 291 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 SQLEQ14534 574 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 TEAD2Q15562 447 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 TAF1AQ15573 450 aaPredicted RBP5.59□□□□□ -1.52
RFFL-202ENST00000394597 HECTD2Q5U5R9 776 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 AGAP7PQ5VUJ5 663 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 FAM46CQ5VWP2 391 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 TMEM236Q5W0B7 351 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 ZDHHC20Q5W0Z9 365 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 FAM91A1Q658Y4 838 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 ZNF57Q68EA5 555 aaPredicted RBP5.59□□□□□ -1.52
RFFL-202ENST00000394597 CERS6Q6ZMG9 384 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 RASSF6Q6ZTQ3 369 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 CDHR3Q6ZTQ4 885 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 GRASPQ7Z6J2 395 aaPredicted RBP5.59□□□□□ -1.52
RFFL-202ENST00000394597 KRT73Q86Y46 540 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 IGDCC3Q8IVU1 814 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 OR8D1Q8WZ84 308 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 TMEM159Q96B96 161 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 ALPK1Q96QP1 1244 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 FERD3LQ96RJ6 166 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 AGAP2Q99490 1192 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 TUBA1CQ9BQE3 449 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 BEX2Q9BXY8 128 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 MARCH5Q9NX47 278 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 WBP1LQ9NX94 342 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 GPSM3Q9Y4H4 160 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 TESMINQ9Y4I5 508 aa5.59□□□□□ -1.52
RFFL-202ENST00000394597 C2orf78A6NCI8 922 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CXorf49A8MYA2 514 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 EFCAB9A8MZ26 197 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 HHLA1C9JL84 531 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 AIREO43918 545 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 LATS1O95835 1130 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ANGPTL1O95841 491 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 IL1BP01584 269 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 EPOP01588 193 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 HNRNPA1P09651 372 aaKnown RBP eCLIP5.58□□□□□ -1.52
RFFL-202ENST00000394597 FOSL1P15407 271 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 PRKCHP24723 683 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 GTF2E2P29084 291 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 DGKGP49619 791 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 PLK1P53350 603 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 VBP1P61758 197 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 TXNL4AP83876 142 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 PPP2R2BQ00005 443 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 PFKPQ01813 784 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CEACAM7Q14002 265 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SEMA3AQ14563 771 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SGO1Q5FBB7 561 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ZC3H12BQ5HYM0 836 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 PPM1JQ5JR12 505 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ATXN7L2Q5T6C5 722 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 MZT2BQ6NZ67 158 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 FAM122CQ6P4D5 195 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms