RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 SMPD4Q9NXE4 827 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 ARL5CA6NH57 179 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 LTA4HP09960 611 aaKnown RBP18.5■□□□□ 0.55
HOXC6-202ENST00000394331 HTR7P34969 479 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 TGFBR1P36897 503 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 ZFP36L2P47974 494 aaKnown RBP18.5■□□□□ 0.55
HOXC6-202ENST00000394331 PPP3CCP48454 512 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 AFF1P51825 1210 aaKnown RBP18.5■□□□□ 0.55
HOXC6-202ENST00000394331 TNK1Q13470 666 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 RPS6KA2Q15349 733 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 SLC14A2Q15849 920 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 TIGD3Q6B0B8 471 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 HID1Q8IV36 788 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 DTWD1Q8N5C7 304 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 ATPAF2Q8N5M1 289 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 FLCNQ8NFG4 579 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 OR52E4Q8NGH9 312 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 SNAPC3Q92966 411 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 ITM2CQ9NQX7 267 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 NUDT5Q9UKK9 219 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 SNX6Q9UNH7 406 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 MEIOCA2RUB1 952 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 DFFAO00273 331 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 HNF4AP41235 474 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 APLP1P51693 650 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 RAPSNQ13702 412 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 GRB7Q14451 532 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 UPP1Q16831 310 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 AAK1Q2M2I8 961 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 KANK2Q63ZY3 851 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 FAM171BQ6P995 826 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 UTS2BQ765I0 119 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 CCDC117Q8IWD4 279 aaPredicted RBP18.5■□□□□ 0.55
HOXC6-202ENST00000394331 EID3Q8N140 333 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 OMA1Q96E52 524 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 TMEFF2Q9UIK5 374 aaPredicted RBP18.5■□□□□ 0.55
HOXC6-202ENST00000394331 ZNF638Q14966 1978 aaKnown RBP18.5■□□□□ 0.55
HOXC6-202ENST00000394331 CASTOR2A6NHX0 329 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 KPNA6O60684 536 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 FADS2O95864 444 aaKnown RBP18.5■□□□□ 0.55
HOXC6-202ENST00000394331 CST1P01037 141 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 CAPN1P07384 714 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 SERPINF2P08697 491 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 EFNA1P20827 205 aaPredicted RBP18.5■□□□□ 0.55
HOXC6-202ENST00000394331 SCNN1GP51170 649 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 SLC12A2P55011 1212 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 CDH13P55290 713 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 PAGE3Q5JUK9 113 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 LETMD1Q6P1Q0 360 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 CREB3L2Q70SY1 520 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 NRARPQ7Z6K4 114 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 DPP10Q8N608 796 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 PAF1Q8N7H5 531 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 LPPQ93052 612 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 C2orf49Q9BVC5 232 aaPredicted RBP18.5■□□□□ 0.55
HOXC6-202ENST00000394331 B3GNT2Q9NY97 397 aa18.5■□□□□ 0.55
HOXC6-202ENST00000394331 AP3D1O14617 1153 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 FGF10O15520 208 aaPredicted RBP18.49■□□□□ 0.55
HOXC6-202ENST00000394331 ARHGEF9O43307 516 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 SLC9A3P48764 834 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 C2CD4AQ8NCU7 369 aaPredicted RBP18.49■□□□□ 0.55
HOXC6-202ENST00000394331 PPHLN1Q8NEY8 458 aaKnown RBP18.49■□□□□ 0.55
HOXC6-202ENST00000394331 TWIST2Q8WVJ9 160 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 TMEM74Q96NL1 305 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 RTP3Q9BQQ7 232 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 C1QTNF7Q9BXJ2 289 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 SIK2Q9H0K1 926 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 CATSPERBQ9H7T0 1116 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 LIN7BQ9HAP6 207 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 GLOD4Q9HC38 313 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 EIF3KQ9UBQ5 218 aaKnown RBP18.49■□□□□ 0.55
HOXC6-202ENST00000394331 PCDHB14Q9Y5E9 798 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 LEUTXA8MZ59 168 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 HS6ST1O60243 411 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 C1RP00736 705 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 IGLV3-25P01717 112 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 CES1P23141 567 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 FMO4P31512 558 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 CTSKP43235 329 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 GEMP55040 296 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 HUNKP57058 714 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 CSHL1Q14406 222 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 CCL14Q16627 93 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 NECAB2Q7Z6G3 386 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 HIPK1Q86Z02 1210 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 ADHFE1Q8IWW8 467 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 SPATA22Q8NHS9 363 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 POP5Q969H6 163 aaKnown RBP18.49■□□□□ 0.55
HOXC6-202ENST00000394331 ACAT2Q9BWD1 397 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 KCNN2Q9H2S1 579 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 NIPAL2Q9H841 368 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 RNF6Q9Y252 685 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 POLHQ9Y253 713 aa18.49■□□□□ 0.55
HOXC6-202ENST00000394331 TRIP12Q14669 1992 aaPredicted RBP18.48■□□□□ 0.55
HOXC6-202ENST00000394331 PIP5K1BO14986 540 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 PRR35P0CG20 571 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 SRP54P61011 504 aaKnown RBP18.48■□□□□ 0.55
HOXC6-202ENST00000394331 FUT11Q495W5 492 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 IPMKQ8NFU5 416 aa18.48■□□□□ 0.55
HOXC6-202ENST00000394331 ROGDIQ9GZN7 287 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms