RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 A6NL46 340 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 PDZK1P1A8MUH7 402 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 H3BNX3 289 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 HTRA2O43464 458 aaPredicted RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 SMAD6O43541 496 aaKnown RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 NOBOXO60393 691 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 ALOX12P18054 663 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 APLP1P51693 650 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 MERTKQ12866 999 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 LRP8Q14114 963 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 PAGE2BQ5JRK9 111 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 SPANXN4Q5MJ08 99 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 ERMP1Q7Z2K6 904 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 GALNT5Q7Z7M9 940 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 P3H2Q8IVL5 708 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 BBS7Q8IWZ6 715 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 C8orf59Q8N0T1 100 aaPredicted RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 C2orf73Q8N5S3 287 aaPredicted RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 LINC01599Q8WXQ3 324 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 ATOH8Q96SQ7 321 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 MTERF1Q99551 399 aaKnown RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 ACAT2Q9BWD1 397 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 TPK1Q9H3S4 243 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 MYCLP1P12525 358 aaPredicted RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 ZNF182P17025 639 aaPredicted RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 LAPTM5Q13571 262 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 SETMARQ53H47 684 aaPredicted RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 CD300LGQ6UXG3 332 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 PROSER1Q86XN7 944 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 HID1Q8IV36 788 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 TRPV3Q8NET8 790 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 PEX13Q92968 403 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 AURKBQ96GD4 344 aaPredicted RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 CGREF1Q99674 301 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 ARPC5LQ9BPX5 153 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 CDC14AQ9UNH5 594 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 INSL5Q9Y5Q6 135 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 ELOVL7A1L3X0 281 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 G3V2T6 193 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 TMEM189-UBE2V1I3L0A0 370 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 CCNKO75909 580 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 CATP04040 527 aaKnown RBP10.32□□□□□ -0.76
CALD1-203ENST00000393118 RCVRNP35243 200 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 NSG1P42857 185 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 ERVPABLB-1P60509 514 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 NAE1Q13564 534 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 SPDYE7PQ495Y7 208 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 PAGE3Q5JUK9 113 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 LRRC66Q68CR7 880 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 CHST9Q7L1S5 443 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 NECAB2Q7Z6G3 386 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 TSPAN33Q86UF1 283 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 ING5Q8WYH8 240 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 SLC47A1Q96FL8 570 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 TMEM175Q9BSA9 504 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 MARCH5Q9NX47 278 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 STMN3Q9NZ72 180 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 PCTPQ9UKL6 214 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 STX16O14662 325 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 EPN2O95208 641 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 ADH1AP07327 375 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 GPX3P22352 226 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 S100A5P33763 92 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 HNF1BP35680 557 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 DEFA1P59665 94 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 DEFA3P59666 94 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 CHIT1Q13231 466 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 NFATC2Q13469 925 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 SULT1C3Q6IMI6 304 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 LETMD1Q6P1Q0 360 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 NEK5Q6P3R8 708 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 BLOC1S3Q6QNY0 202 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 ADHFE1Q8IWW8 467 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 IQCF2Q8IXL9 164 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 PHACTR4Q8IZ21 702 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 CLIP4Q8N3C7 705 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 OR2AP1Q8NGE2 309 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 ACDQ96AP0 544 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 SLC22A12Q96S37 553 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 C6orf62Q9GZU0 229 aaPredicted RBP10.32□□□□□ -0.76
CALD1-203ENST00000393118 TOR3AQ9H497 397 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 POPDC3Q9HBV1 291 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 HPS4Q9NQG7 708 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 SCN3BQ9NY72 215 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 SLAMF8Q9P0V8 285 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 DHRS7Q9Y394 339 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 SNX8Q9Y5X2 465 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 UPK3BL1B0FP48 263 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 HNRNPCL2B2RXH8 293 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 UPK3BL2E5RIL1 263 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 SOCS2O14508 198 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 SLC6A2P23975 617 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 RPL10P27635 214 aaKnown RBP10.32□□□□□ -0.76
CALD1-203ENST00000393118 ZNF140P52738 457 aaPredicted RBP10.32□□□□□ -0.76
CALD1-203ENST00000393118 NFKB2Q00653 900 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 UBE3AQ05086 875 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 DMC1Q14565 340 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 ABRAXAS2Q15018 415 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 TPGS2Q68CL5 300 aa10.32□□□□□ -0.76
CALD1-203ENST00000393118 UGT2A3Q6UWM9 527 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms