RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TMBIM1Q969X1 311 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 TP53INP1Q96A56 240 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 CDK15Q96Q40 435 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 OSBPL2Q9H1P3 480 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.89□□□□□ -0.35
LCA5-202ENST00000392959 ZIM2Q9NZV7 527 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 ACTR3BQ9P1U1 418 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 GALPQ9UBC7 116 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 MRTO4Q9UKD2 239 aaKnown RBP12.89□□□□□ -0.35
LCA5-202ENST00000392959 RPL36Q9Y3U8 105 aaKnown RBP12.89□□□□□ -0.35
LCA5-202ENST00000392959 XKRYO14609 159 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 OR1F1O43749 312 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 SLC10A7Q0GE19 358 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 TIGD5Q53EQ6 642 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 KLHL22Q53GT1 634 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 ATXN7L2Q5T6C5 722 aaPredicted RBP12.89□□□□□ -0.35
LCA5-202ENST00000392959 RGMBQ6NW40 437 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 MSANTD2Q6P1R3 559 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 KLHL35Q6PF15 583 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 TMEM220Q6QAJ8 160 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 FRRS1Q6ZNA5 592 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 CPQQ9Y646 472 aa12.89□□□□□ -0.35
LCA5-202ENST00000392959 TEX28O15482 410 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 PI15O43692 258 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 ECI2O75521 394 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 LAG3P18627 525 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 RFTN1Q14699 578 aaPredicted RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 C9orf43Q8TAL5 461 aaPredicted RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 STON2Q8WXE9 905 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 WRAP53Q9BUR4 548 aaKnown RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 FAM53CQ9NYF3 392 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 SELPP16109 830 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 TARDBPQ13148 414 aaKnown RBP eCLIP12.88□□□□□ -0.35
LCA5-202ENST00000392959 TIFABQ6ZNK6 161 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 SNX20Q7Z614 316 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 UFD1Q92890 307 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 PLD4Q96BZ4 506 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 RPL10LQ96L21 214 aaKnown RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 SIGLEC10Q96LC7 697 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 HEPHQ9BQS7 1158 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 ZBTB26Q9HCK0 441 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 COMMD3Q9UBI1 195 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 CLIC1O00299 241 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 TPST2O60704 377 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 USP2O75604 605 aaPredicted RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 BCAS2O75934 225 aaPredicted RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 RSL1D1O76021 490 aaKnown RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 F7P08709 466 aaPredicted RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 DGKQP52824 942 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 PPP1R8Q12972 351 aaKnown RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 GPR33Q49SQ1 333 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 TNFAIP8L2Q6P589 184 aaPredicted RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 PDSS2Q86YH6 399 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 ARL14EPQ8N8R7 260 aaPredicted RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 MINDY2Q8NBR6 621 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 OR9I1Q8NGQ6 314 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 C7orf43Q8WVR3 580 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 HAVCR1Q96D42 359 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 ZBED6CLQ96FA7 236 aaPredicted RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 C5orf34Q96MH7 638 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 TMLHEQ9NVH6 421 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 RBM7Q9Y580 266 aaKnown RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 GMEB1Q9Y692 573 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 VARSP26640 1264 aaKnown RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 DNAJA1P31689 397 aaKnown RBP12.88□□□□□ -0.35
LCA5-202ENST00000392959 MVKQ03426 396 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 GRB14Q14449 540 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 SLC35G1Q2M3R5 365 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 FBXO42Q6P3S6 717 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 ATCAYQ86WG3 371 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 CLIP4Q8N3C7 705 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 PLEKHO2Q8TD55 490 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 KBTBD7Q8WVZ9 684 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 B3GALT6Q96L58 329 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 DMRTB1Q96MA1 342 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 PTPN18Q99952 460 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 DCSTAMPQ9H295 470 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 HIPK3Q9H422 1215 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 CACNG4Q9UBN1 327 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 FBXW2Q9UKT8 454 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 TLR6Q9Y2C9 796 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
LCA5-202ENST00000392959 PRAMEF33A0A0G2JMD5 474 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 PRAMEF10O60809 474 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 RPS24P62847 133 aaKnown RBP12.87□□□□□ -0.35
LCA5-202ENST00000392959 NFKB2Q00653 900 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 FOXM1Q08050 763 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 COLEC12Q5KU26 742 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 MBLAC2Q68D91 279 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 ERMP1Q7Z2K6 904 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 TAF8Q7Z7C8 310 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 FAM124AQ86V42 546 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 RANBP3LQ86VV4 465 aaPredicted RBP12.87□□□□□ -0.35
LCA5-202ENST00000392959 RELL1Q8IUW5 271 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 PYCR2Q96C36 320 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 SLC35G5Q96KT7 338 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 OR51V1Q9H2C8 321 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 MAGEE1Q9HCI5 957 aa12.87□□□□□ -0.35
LCA5-202ENST00000392959 DNAAF2Q9NVR5 837 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms