RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MAMLD1Q13495 774 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 IRF3Q14653 427 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 CRYMQ14894 314 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 E2F5Q15329 346 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 PHLDA2Q53GA4 152 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 ZNF343Q6P1L6 599 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 GPRIN3Q6ZVF9 776 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 BTN2A1Q7KYR7 527 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 HOGA1Q86XE5 327 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 EXOC8Q8IYI6 725 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 KIRREL3Q8IZU9 778 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 PRSS33Q8NF86 280 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 OR5M8Q8NGP6 311 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 FOXN4Q96NZ1 517 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 RTN4RQ9BZR6 473 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 HRH4Q9H3N8 390 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 CHMP1AQ9HD42 196 aaPredicted RBP2.8□□□□□ -1.96
TRAV40-201ENST00000390467 KRT84Q9NSB2 600 aa2.8□□□□□ -1.96
TRAV40-201ENST00000390467 SEPT11Q9NVA2 429 aaKnown RBP2.8□□□□□ -1.96
TRAV40-201ENST00000390467 LARSQ9P2J5 1176 aaKnown RBP2.8□□□□□ -1.96
TRAV40-201ENST00000390467 A0A087X0M5 115 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 IGKV6D-41A0A0C4DH26 115 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 A0A1B0GX30 115 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 PGPEP1LA6NFU8 196 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 SOCS3O14543 225 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 PAPSS1O43252 624 aaPredicted RBP2.79□□□□□ -1.96
TRAV40-201ENST00000390467 XRCC3O43542 346 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 DFFBO76075 338 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 NXPH2O95156 264 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 MBD4O95243 580 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 IGHV4-31P0DP07 118 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 ACADMP11310 421 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 LEPRP48357 1165 aaKnown RBP2.79□□□□□ -1.96
TRAV40-201ENST00000390467 TPD52P55327 224 aaPredicted RBP2.79□□□□□ -1.96
TRAV40-201ENST00000390467 GSDMDP57764 484 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 KRTAP12-2P59991 146 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 TMF1P82094 1093 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 COX10Q12887 443 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 KRT33BQ14525 404 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 SQLEQ14534 574 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 HLA-BQ31612 363 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 ITPRIPL2Q3MIP1 535 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 XKR3Q5GH77 459 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 SPDYCQ5MJ68 293 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 FIP1L1Q6UN15 594 aaKnown RBP2.79□□□□□ -1.96
TRAV40-201ENST00000390467 CDC20BQ86Y33 519 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 TMEM139Q8IV31 216 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 ADGRF2Q8IZF7 708 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 ARHGAP24Q8N264 748 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 Q8N377 158 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 MARVELD2Q8N4S9 558 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 SMAP2Q8WU79 429 aaPredicted RBP2.79□□□□□ -1.96
TRAV40-201ENST00000390467 IRGQQ8WZA9 623 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 LRRC59Q96AG4 307 aaKnown RBP2.79□□□□□ -1.96
TRAV40-201ENST00000390467 GPATCH1Q9BRR8 931 aaKnown RBP2.79□□□□□ -1.96
TRAV40-201ENST00000390467 LRRC61Q9BV99 259 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 NUP85Q9BW27 656 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 DGCR6LQ9BY27 220 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 SHARPINQ9H0F6 387 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 UPF3AQ9H1J1 476 aaKnown RBP2.79□□□□□ -1.96
TRAV40-201ENST00000390467 PANK4Q9NVE7 773 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 FAM120CQ9NX05 1096 aaKnown RBP2.79□□□□□ -1.96
TRAV40-201ENST00000390467 HACL1Q9UJ83 578 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.79□□□□□ -1.96
TRAV40-201ENST00000390467 PLAGL1Q9UM63 463 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 PPP1R3CQ9UQK1 317 aa2.79□□□□□ -1.96
TRAV40-201ENST00000390467 CROCCQ5TZA2 2017 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 FEZF1A0PJY2 475 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 PI4KAP2A4QPH2 592 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 CYP2A7P20853 494 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 GABRA5P31644 462 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 MFAP4P55083 255 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 GSCP56915 257 aaPredicted RBP2.78□□□□□ -1.96
TRAV40-201ENST00000390467 DCAF7P61962 342 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 TAF1BQ53T94 588 aaPredicted RBP2.78□□□□□ -1.96
TRAV40-201ENST00000390467 FIGLAQ6QHK4 219 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 HAUS6Q7Z4H7 955 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 LDB1Q86U70 411 aaPredicted RBP2.78□□□□□ -1.96
TRAV40-201ENST00000390467 CFAP206Q8IYR0 622 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 FBXL16Q8N461 479 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.78□□□□□ -1.96
TRAV40-201ENST00000390467 OR11H4Q8NGC9 324 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 ZNF519Q8TB69 540 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 USP28Q96RU2 1077 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 KRT12Q99456 494 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 BTBD10Q9BSF8 475 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 LMF2Q9BU23 707 aaKnown RBP2.78□□□□□ -1.96
TRAV40-201ENST00000390467 FNDC11Q9BVV2 318 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 PRR34Q9NV39 138 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 NUDT4Q9NZJ9 180 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 CACNG4Q9UBN1 327 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 DAPK2Q9UIK4 370 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 PPP2R2CQ9Y2T4 447 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 MOB4Q9Y3A3 225 aa2.78□□□□□ -1.96
TRAV40-201ENST00000390467 ABCA7Q8IZY2 2146 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 IGHV3OR16-10A0A075B7F0 116 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 A0A1W2PPR1 153 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 CCDC189A1A4V9 331 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 LRRC72A6NJI9 287 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 C15orf61A6NNL5 157 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms