RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 KCNJ9Q92806 393 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 CMKLR1Q99788 373 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 SMYD2Q9NRG4 433 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 TRMT6Q9UJA5 497 aaKnown RBP18.84■□□□□ 0.61
GTF3A-201ENST00000381140 MED16Q9Y2X0 877 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 PCM1Q15154 2024 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 FRYQ5TBA9 3013 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 TCRBV9S1A1TA0A576 114 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 GSAPA4D1B5 854 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 OR5K3A6NET4 321 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 TNFSF15O95150 251 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 RPN2P04844 631 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 ITIH1P19827 911 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 SAT1P21673 171 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 RBMS1P29558 406 aaKnown RBP18.83■□□□□ 0.61
GTF3A-201ENST00000381140 HSD17B3P37058 310 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 LSSP48449 732 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 SEPHS1P49903 392 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 MAPK10P53779 464 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 PRKAA1Q13131 559 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 TRA2AQ13595 282 aaKnown RBP eCLIP18.83■□□□□ 0.61
GTF3A-201ENST00000381140 UAP1Q16222 522 aaPredicted RBP18.83■□□□□ 0.61
GTF3A-201ENST00000381140 CACHD1Q5VU97 1274 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 UNC5DQ6UXZ4 953 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 AMIGO1Q86WK6 493 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 FAM129CQ86XR2 697 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 CPNE9Q8IYJ1 553 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 ZCCHC14Q8WYQ9 949 aaKnown RBP18.83■□□□□ 0.61
GTF3A-201ENST00000381140 INPP5DQ92835 1189 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 ZDHHC12Q96GR4 267 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 FOPNLQ96NB1 174 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 CDC42EP4Q9H3Q1 356 aaKnown RBP18.83■□□□□ 0.61
GTF3A-201ENST00000381140 POLG2Q9UHN1 485 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 ICKQ9UPZ9 632 aa18.83■□□□□ 0.61
GTF3A-201ENST00000381140 ADAMTS20P59510 1910 aa18.83■□□□□ 0.6
GTF3A-201ENST00000381140 ACACBO00763 2458 aa18.83■□□□□ 0.6
GTF3A-201ENST00000381140 IGF2RP11717 2491 aa18.83■□□□□ 0.6
GTF3A-201ENST00000381140 CXorf49A8MYA2 514 aaPredicted RBP18.82■□□□□ 0.6
GTF3A-201ENST00000381140 C9P02748 559 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 GSTA2P09210 222 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 CDKN2DP55273 166 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 EIF3IQ13347 325 aaKnown RBP18.82■□□□□ 0.6
GTF3A-201ENST00000381140 KLHL38Q2WGJ6 581 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 GALNT7Q86SF2 657 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 DCUN1D3Q8IWE4 304 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 CTAGE3PQ8IX95 158 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 AGBL5Q8NDL9 886 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 CD200R1Q8TD46 325 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 CDKL2Q92772 493 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 ELMO2Q96JJ3 720 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 EPB41L4BQ9H329 900 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 TFB2MQ9H5Q4 396 aaKnown RBP18.82■□□□□ 0.6
GTF3A-201ENST00000381140 LRRC4CQ9HCJ2 640 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 LATS2Q9NRM7 1088 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 TAS2R13Q9NYV9 303 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 TXNDC16Q9P2K2 825 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 DHRS7Q9Y394 339 aa18.82■□□□□ 0.6
GTF3A-201ENST00000381140 EFCAB7A8K855 629 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 BTN3A3O00478 584 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 BTN3A1O00481 513 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 HGSO14964 777 aaPredicted RBP18.81■□□□□ 0.6
GTF3A-201ENST00000381140 KDM1AO60341 852 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 SASH3O75995 380 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 CCL4P13236 92 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 ATP5DP30049 168 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 SHMT2P34897 504 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 ETV5P41161 510 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 PGGT1BP53609 377 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 GBX1Q14549 363 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 KYNUQ16719 465 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 HECTD2Q5U5R9 776 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 UGT3A1Q6NUS8 523 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 TTC23LQ6PF05 361 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 SLC26A11Q86WA9 606 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 FBF1Q8TES7 1133 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 NSMCE4AQ9NXX6 385 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 PDP2Q9P2J9 529 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 MAP1BP46821 2468 aaKnown RBP18.81■□□□□ 0.6
GTF3A-201ENST00000381140 ACACAQ13085 2346 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 KRT87PA6NCN2 255 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 RIPK2O43353 540 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 TPBGLP0DKB5 382 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 STX2P32856 288 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 PDAP1Q13442 181 aaKnown RBP18.81■□□□□ 0.6
GTF3A-201ENST00000381140 FAM45BPQ6NSW5 357 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 PIWIL4Q7Z3Z4 852 aaKnown RBP18.81■□□□□ 0.6
GTF3A-201ENST00000381140 ARHGAP22Q7Z5H3 698 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 TAX1BP1Q86VP1 789 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 ZC3HC1Q86WB0 502 aaKnown RBP18.81■□□□□ 0.6
GTF3A-201ENST00000381140 IQCKQ8N0W5 287 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 C2orf73Q8N5S3 287 aaPredicted RBP18.81■□□□□ 0.6
GTF3A-201ENST00000381140 PPM1NQ8N819 430 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 LMNTD1Q8N9Z9 388 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 FAM45AQ8TCE6 357 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 UBLCP1Q8WVY7 318 aaPredicted RBP18.81■□□□□ 0.6
GTF3A-201ENST00000381140 PRR11Q96HE9 360 aaPredicted RBP18.81■□□□□ 0.6
GTF3A-201ENST00000381140 IL17FQ96PD4 163 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 MAP3K3Q99759 626 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 OCIAD1Q9NX40 245 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 NINJ2Q9NZG7 142 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms