RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 CA5AP35218 305 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 UGT1A3P35503 534 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 UGT1A5P35504 534 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 CSKP41240 450 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 RAB15P59190 212 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 GABARAPL2P60520 117 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 PPP2R2BQ00005 443 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 CDH18Q13634 790 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 ZC3H7AQ8IWR0 971 aaKnown RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 MSRB3Q8IXL7 192 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 SPARTQ8N0X7 666 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 HJURPQ8NCD3 748 aaPredicted RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 DDHD1Q8NEL9 900 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 OR6K2Q8NGY2 324 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 OR5K1Q8NHB7 308 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 MTFMTQ96DP5 389 aaKnown RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 SLC29A3Q9BZD2 475 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 RDH14Q9HBH5 336 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 DCAF13Q9NV06 445 aaKnown RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 PSME2Q9UL46 239 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 ORC6Q9Y5N6 252 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 HS6ST1O60243 411 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 NBNO60934 754 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 ERN1O75460 977 aaKnown RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 CREG1O75629 220 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 STK16O75716 305 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 CLDN7O95471 211 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 SEC24AO95486 1093 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 KRT6AP02538 564 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 KRT6BP04259 564 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 KRT6CP48668 564 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 PLD1Q13393 1074 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 ARHGEF7Q14155 803 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 PON2Q15165 354 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 MEP1AQ16819 746 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 ANKDD1AQ495B1 522 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 C16orf87Q6PH81 154 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 MACC1Q6ZN28 852 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 GPR149Q86SP6 731 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 HS3ST5Q8IZT8 346 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 CHDHQ8NE62 594 aaPredicted RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 SNRNP27Q8WVK2 155 aaKnown RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 FAM120BQ96EK7 910 aaKnown RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 C19orf43Q9BQ61 176 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 BEGAINQ9BUH8 593 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 AMBRA1Q9C0C7 1298 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 KAT8Q9H7Z6 458 aaKnown RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 GPN2Q9H9Y4 310 aaPredicted RBP15.97■□□□□ 0.15
VPS16-203ENST00000380469 STARD7Q9NQZ5 370 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 LMCD1Q9NZU5 365 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 STOML2Q9UJZ1 356 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 C3orf18Q9UK00 162 aa15.97■□□□□ 0.15
VPS16-203ENST00000380469 TRBV5-4A0A0C4DH59 114 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 FAM220BPB1ANY3 271 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 K7ERQ8 282 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 SCAMP3O14828 347 aaKnown RBP15.96■□□□□ 0.15
VPS16-203ENST00000380469 ARHGEF15O94989 841 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 CLDN9O95484 217 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 TRBC1P01850 177 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 BCKDHAP12694 445 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 TM4SF4P48230 202 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 SMAD3P84022 425 aaKnown RBP15.96■□□□□ 0.15
VPS16-203ENST00000380469 KCNAB2Q13303 367 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 GPR33Q49SQ1 333 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 USP39Q53GS9 565 aaKnown RBP15.96■□□□□ 0.15
VPS16-203ENST00000380469 KIAA1841Q6NSI8 718 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 SUSD1Q6UWL2 747 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 PHACTR4Q8IZ21 702 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 CLHC1Q8NHS4 586 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 USP7Q93009 1102 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 PLEKHA8Q96JA3 519 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 HTATIP2Q9BUP3 242 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 RMND5AQ9H871 391 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 AFF4Q9UHB7 1163 aaKnown RBP15.96■□□□□ 0.15
VPS16-203ENST00000380469 UTS2RQ9UKP6 389 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 PCDHB14Q9Y5E9 798 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 OR51B4Q9Y5P0 310 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 SNX5Q9Y5X3 404 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 LOC100130705A0A1B0GUX0 176 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 RECQL5O94762 991 aaPredicted RBP15.96■□□□□ 0.15
VPS16-203ENST00000380469 ANXA5P08758 320 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 INHBBP09529 407 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 BPIP17213 487 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 S100A3P33764 101 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 HNF1BP35680 557 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 GGT5P36269 586 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 NRIP1P48552 1158 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 VAC14Q08AM6 782 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 CHRNA6Q15825 494 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 GRAMD4Q6IC98 578 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 RETSATQ6NUM9 610 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 DUS1LQ6P1R4 473 aaKnown RBP15.96■□□□□ 0.15
VPS16-203ENST00000380469 TMEM132CQ8N3T6 1108 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 ZCCHC7Q8N3Z6 543 aaKnown RBP15.96■□□□□ 0.15
VPS16-203ENST00000380469 DCAF4L2Q8NA75 395 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 KCNH6Q9H252 994 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 PARVBQ9HBI1 364 aa15.96■□□□□ 0.15
VPS16-203ENST00000380469 WARS2Q9UGM6 360 aaKnown RBP15.96■□□□□ 0.15
VPS16-203ENST00000380469 BACE2Q9Y5Z0 518 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms