RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 L3MBTL4Q8NA19 623 aa22.58■■□□□ 1.21
VPS16-201ENST00000380443 DNAJB8Q8NHS0 232 aa22.58■■□□□ 1.21
VPS16-201ENST00000380443 LRRC3BQ96PB8 259 aa22.58■■□□□ 1.21
VPS16-201ENST00000380443 LRTM1Q9HBL6 345 aa22.58■■□□□ 1.21
VPS16-201ENST00000380443 PER2O15055 1255 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 GPIP06744 558 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 ELFN1P0C7U0 828 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 UMPSP11172 480 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 ACPPP15309 386 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 IL10P22301 178 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 PRPH2P23942 346 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 VARSP26640 1264 aaKnown RBP22.57■■□□□ 1.2
VPS16-201ENST00000380443 HTR1EP28566 365 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 CCR3P51677 355 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 FOLH1Q04609 750 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 ELP6Q0PNE2 266 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 CAPRIN1Q14444 709 aaKnown RBP22.57■■□□□ 1.2
VPS16-201ENST00000380443 TIGD2Q4W5G0 525 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 ZNF765Q7L2R6 523 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 DET1Q7L5Y6 550 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 SKA2Q8WVK7 121 aaPredicted RBP22.57■■□□□ 1.2
VPS16-201ENST00000380443 ATL1Q8WXF7 558 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 GLMNQ92990 594 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 GLYATL1Q969I3 302 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 FBXL8Q96CD0 374 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 ABCG8Q9H221 673 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 ALG2Q9H553 416 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 DNAJC11Q9NVH1 559 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 C1orf109Q9NX04 203 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 POLR3HQ9Y535 204 aaPredicted RBP22.57■■□□□ 1.2
VPS16-201ENST00000380443 SNX13Q9Y5W8 968 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 EDDM13A0A1B0GTR0 161 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 WNT9AO14904 365 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 SGTAO43765 313 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 UGDHO60701 494 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 GSTM1P09488 218 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 GSTM4Q03013 218 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 BOP1Q14137 746 aaKnown RBP22.57■■□□□ 1.2
VPS16-201ENST00000380443 FXNQ16595 210 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 CAPRIN2Q6IMN6 1127 aaKnown RBP22.57■■□□□ 1.2
VPS16-201ENST00000380443 PROSER1Q86XN7 944 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 MARVELD2Q8N4S9 558 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 SLCO4A1Q96BD0 722 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 MIEF2Q96C03 454 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 ACTL8Q9H568 366 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 DLGAP2Q9P1A6 1054 aa22.57■■□□□ 1.2
VPS16-201ENST00000380443 C9JVG2 144 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 ATG13O75143 517 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 RSL1D1O76021 490 aaKnown RBP22.56■■□□□ 1.2
VPS16-201ENST00000380443 IL6P05231 212 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 ITGB7P26010 798 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 GRIA3P42263 894 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 GSK3BP49841 420 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 ERVK-21P61565 698 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 PWP1Q13610 501 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 NANOGP8Q6NSW7 305 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 CYP2R1Q6VVX0 501 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 KLHDC8AQ8IYD2 350 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 AADATQ8N5Z0 425 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 DEFB123Q8N688 67 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 OR8D1Q8WZ84 308 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 KCTD14Q9BQ13 255 aaPredicted RBP22.56■■□□□ 1.2
VPS16-201ENST00000380443 NANOGQ9H9S0 305 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 DEC1Q9P2X7 70 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 TMED5Q9Y3A6 229 aa22.56■■□□□ 1.2
VPS16-201ENST00000380443 FADS2P1A8MWK0 482 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 PRPS2P11908 318 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 ATP6V1B2P21281 511 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 PSMA4P25789 261 aaKnown RBP22.55■■□□□ 1.2
VPS16-201ENST00000380443 MAP4P27816 1152 aaKnown RBP22.55■■□□□ 1.2
VPS16-201ENST00000380443 MAPK1P28482 360 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 PRLHRP49683 370 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 RPL38P63173 70 aaKnown RBP22.55■■□□□ 1.2
VPS16-201ENST00000380443 LIPEQ05469 1076 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 KIAA0040Q15053 153 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 PDGFRLQ15198 375 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 MBOAT1Q6ZNC8 495 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 PARS2Q7L3T8 475 aaKnown RBP22.55■■□□□ 1.2
VPS16-201ENST00000380443 RGL4Q8IZJ4 473 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 OR8J3Q8NGG0 315 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 DNAJB14Q8TBM8 379 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 MYLIPQ8WY64 445 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 SMARCD2Q92925 531 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 AP2M1Q96CW1 435 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 SLC45A3Q96JT2 553 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 CCM2Q9BSQ5 444 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 TTYH1Q9H313 450 aaPredicted RBP22.55■■□□□ 1.2
VPS16-201ENST00000380443 SFXN1Q9H9B4 322 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 C8orf4Q9NR00 106 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 SZT2Q5T011 3432 aa22.55■■□□□ 1.2
VPS16-201ENST00000380443 DHRS12A0PJE2 317 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 FFAR3O14843 346 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 GPR42O15529 346 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 AP1G1O43747 822 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 PSIP1O75475 530 aaKnown RBP22.54■■□□□ 1.2
VPS16-201ENST00000380443 FCGR1AP12314 374 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 BMP2P12643 396 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 EPORP19235 508 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 ACOX1Q15067 660 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 HNRNPA1L2Q32P51 320 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 596.3 ms