RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 FAM86C1Q9NVL1 165 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 ARMC1Q9NVT9 282 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 DUS2Q9NX74 493 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 ARL15Q9NXU5 204 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 TSR3Q9UJK0 312 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 TMPRSS11EQ9UL52 423 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 PDE10AQ9Y233 779 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 ANKRD12Q6UB98 2062 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 ATG2AQ2TAZ0 1938 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 SERTM1A2A2V5 107 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 TTC34A8MYJ7 566 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 GFYI3L273 518 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 MANBAO00462 879 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 CSPG5O95196 566 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 NFATC1O95644 943 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 PRNPP04156 253 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 MSX2P35548 267 aaPredicted RBP10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 GNPDA1P46926 289 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 SLC6A12P48065 614 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 SEMG2Q02383 582 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 DLX2Q07687 328 aaPredicted RBP10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 CAMK1Q14012 370 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 COL19A1Q14993 1142 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 ABRAXAS2Q15018 415 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 LRRC36Q1X8D7 754 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 ARSIQ5FYB1 569 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 HENMT1Q5T8I9 393 aaKnown RBP10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 CACHD1Q5VU97 1274 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 IL23RQ5VWK5 629 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 FAM219BQ5XKK7 198 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 SCIMPQ6UWF3 145 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 HSD11B1LQ7Z5J1 315 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 RASGRP3Q8IV61 690 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 ADHFE1Q8IWW8 467 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 DNAJB8Q8NHS0 232 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 MCOLN3Q8TDD5 553 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 CYB5D2Q8WUJ1 264 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 UCMAQ8WVF2 138 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 ASZ1Q8WWH4 475 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 ASB11Q8WXH4 323 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 USP7Q93009 1102 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 MRPL38Q96DV4 380 aaKnown RBP10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 ZSWIM3Q96MP5 696 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 PKP2Q99959 881 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 PIDD1Q9HB75 910 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 CMTM6Q9NX76 183 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 AP3M1Q9Y2T2 418 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 CCL27Q9Y4X3 112 aa10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 POLR3HQ9Y535 204 aaPredicted RBP10.24□□□□□ -0.77
POLR2J3-201ENST00000379340 PTPRZ1P23471 2315 aaPredicted RBP10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 ASPDHA6ND91 283 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 C16orf96A6NNT2 1141 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 NPIPB8E9PQR5 432 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 H0Y858 1186 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 ANKRD28O15084 1053 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 HNRNPRO43390 633 aaKnown RBP10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 RNASEH2AO75792 299 aaKnown RBP10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 GPIP06744 558 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 LYNP07948 512 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 UMPSP11172 480 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 ACPPP15309 386 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 IL10P22301 178 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 PRPH2P23942 346 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 VARSP26640 1264 aaKnown RBP10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 MAPK1P28482 360 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 MMP12P39900 470 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 CCR3P51677 355 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 HSPA14Q0VDF9 509 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 EIF4HQ15056 248 aaKnown RBP10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 IMPG1Q17R60 797 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 CAPRIN2Q6IMN6 1127 aaKnown RBP10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 RFLNAQ6ZTI6 216 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 TECPR1Q7Z6L1 1165 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 PROSER1Q86XN7 944 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 HID1Q8IV36 788 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 LILRA2Q8N149 483 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 MARVELD2Q8N4S9 558 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 AADATQ8N5Z0 425 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 NAT16Q8N8M0 369 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 L3MBTL4Q8NA19 623 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 BTN2A2Q8WVV5 523 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 SMG7Q92540 1137 aaKnown RBP10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 ELMO1Q92556 727 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 GLMNQ92990 594 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 MIEF2Q96C03 454 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 SLC39A3Q9BRY0 314 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 ACTR8Q9H981 624 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 IL1RL2Q9HB29 575 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 C8orf4Q9NR00 106 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 CCM2LQ9NUG4 571 aaPredicted RBP10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 OBP2AQ9NY56 170 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 KLQ9UEF7 1012 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 CD84Q9UIB8 345 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 ZNF490Q9ULM2 529 aaPredicted RBP10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 SNX6Q9UNH7 406 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 SNX13Q9Y5W8 968 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 CFAP54Q96N23 3096 aa10.23□□□□□ -0.77
POLR2J3-201ENST00000379340 LOC730098B7Z3J9 87 aa10.22□□□□□ -0.77
POLR2J3-201ENST00000379340 UGDHO60701 494 aa10.22□□□□□ -0.77
POLR2J3-201ENST00000379340 RSL1D1O76021 490 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms