RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 OR5AR1Q8NGP9 310 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 PROKR1Q8TCW9 393 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 GRHL3Q8TE85 626 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 TFGQ92734 400 aaPredicted RBP17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 PTERQ96BW5 349 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 MOCOSQ96EN8 888 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 QKIQ96PU8 341 aaKnown RBP eCLIP17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 AP1M1Q9BXS5 423 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 CDC23Q9UJX2 597 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 FBXL4Q9UKA2 621 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 PLAGL1Q9UM63 463 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 TDRKHQ9Y2W6 561 aaKnown RBP17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 NUP210LQ5VU65 1888 aa17.16■□□□□ 0.34
PDLIM4-202ENST00000379018 PCM1Q15154 2024 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 PRSS44E7EML9 344 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 H7C0C1 242 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 AGPSO00116 658 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 POU3F2P20265 443 aaPredicted RBP17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 ALAS2P22557 587 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 ATP5OP48047 213 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 CDKN1CP49918 316 aaPredicted RBP17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 IRAK1BP1Q5VVH5 260 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 TAS2R42Q7RTR8 314 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 FJX1Q86VR8 437 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 PARP9Q8IXQ6 854 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 SLC34A3Q8N130 599 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 DNAJB14Q8TBM8 379 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 VAT1Q99536 393 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 GORASP1Q9BQQ3 440 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 GBA3Q9H227 469 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 VPS37BQ9H9H4 285 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 SLC6A20Q9NP91 592 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 SPHK1Q9NYA1 384 aa17.15■□□□□ 0.34
PDLIM4-202ENST00000379018 CSMD1Q96PZ7 3565 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 MACROD2A1Z1Q3 448 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 C5orf60A6NFR6 353 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 E2F3O00716 465 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 PRSS56P0CW18 603 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 MC4RP32245 332 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 AIMP2Q13155 320 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 BOP1Q14137 746 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 ZRSR2Q15696 482 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 UNC5AQ6ZN44 842 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 SHISA6Q6ZSJ9 500 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 SNX20Q7Z614 316 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 RHOT2Q8IXI1 618 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 FAM20CQ8IXL6 584 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 OR2A14Q96R47 310 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 BARD1Q99728 777 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 NDC1Q9BTX1 674 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 GOLPH3Q9H4A6 298 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 ENTPD4Q9Y227 616 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 ASF1AQ9Y294 204 aa17.14■□□□□ 0.33
PDLIM4-202ENST00000379018 A0A0J9YY10 115 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 C17orf113A0A1B0GUU1 675 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 ISM1B1AKI9 464 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 ANXA9O76027 345 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 CRTAMO95727 393 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 CHRM5P08912 532 aaPredicted RBP17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 PSMB4P28070 264 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 RBL1P28749 1068 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 SLC1A1P43005 524 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 GABRA4P48169 554 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 SPARCL1Q14515 664 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 ASTE1Q2TB18 679 aaPredicted RBP17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 CCDC181Q5TID7 509 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 PRAMEF13Q5VWM6 474 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 SP5Q6BEB4 398 aaPredicted RBP17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 ITPRIPL1Q6GPH6 555 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 NAPRTQ6XQN6 538 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 SERPINA9Q86WD7 417 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 MCEMP1Q8IX19 187 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 CLDN19Q8N6F1 224 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 PPP4R1Q8TF05 950 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 MAGEB10Q96LZ2 347 aaPredicted RBP17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 ZDHHC3Q9NYG2 299 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 TRHDEQ9UKU6 1024 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 KLHL20Q9Y2M5 609 aa17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.13■□□□□ 0.33
PDLIM4-202ENST00000379018 MYO7BQ6PIF6 2116 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 hCG_1818297A0A087WSY0 165 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 GOLGA6L19H0YKK7 550 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 H3BMH7 237 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 CD63P08962 238 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 SHMT2P34897 504 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 CD151P48509 253 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 ZNF140P52738 457 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 ZNF169Q14929 603 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 TFDP3Q5H9I0 405 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 AGAP7PQ5VUJ5 663 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 MRPL14Q6P1L8 145 aaKnown RBP17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 TLDC1Q6P9B6 456 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 FAM180AQ6UWF9 173 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 TTLL10Q6ZVT0 673 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 METTL27Q8N6F8 245 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 HEXDCQ8WVB3 486 aa17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 DNAJC1Q96KC8 554 aaKnown RBP17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 AGAP4Q96P64 663 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms