RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PAQR3Q6TCH7 311 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 CYHR1Q6ZMK1 362 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 B3GNT8Q7Z7M8 397 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 CPNE9Q8IYJ1 553 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 RAB42Q8N4Z0 105 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 FBXO15Q8NCQ5 510 aaPredicted RBP12.86□□□□□ -0.35
CKAP2-202ENST00000378034 ASB11Q8WXH4 323 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 ATXN7L3BQ96GX2 97 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 PDLIM5Q96HC4 596 aaKnown RBP12.86□□□□□ -0.35
CKAP2-202ENST00000378034 CCDC74BQ96LY2 380 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 GPR22Q99680 433 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 OLFM1Q99784 485 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 TXLNGYQ9BZA5 131 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 SYTL2Q9HCH5 934 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 NFS1Q9Y697 457 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 OR6C74A6NCV1 312 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 PIAS1O75925 651 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 RAB28P51157 221 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 ARHGAP22Q7Z5H3 698 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 RASGRP3Q8IV61 690 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 MYO1HQ8N1T3 1032 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 NKAPQ8N5F7 415 aaKnown RBP12.85□□□□□ -0.35
CKAP2-202ENST00000378034 WDR36Q8NI36 951 aaKnown RBP12.85□□□□□ -0.35
CKAP2-202ENST00000378034 JPH3Q8WXH2 748 aaPredicted RBP12.85□□□□□ -0.35
CKAP2-202ENST00000378034 CMKLR1Q99788 373 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 ICKQ9UPZ9 632 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 MTO1Q9Y2Z2 717 aaKnown RBP12.85□□□□□ -0.35
CKAP2-202ENST00000378034 GFYI3L273 518 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 RASGRF2O14827 1237 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 SLC16A5O15375 505 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 ZBTB14O43829 449 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 C8GP07360 202 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 FAM153BP0C7A2 387 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 TPBGLP0DKB5 382 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 MLLT3P42568 568 aaPredicted RBP12.85□□□□□ -0.35
CKAP2-202ENST00000378034 TAS2R39P59534 338 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 SP140Q13342 867 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 GRB7Q14451 532 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 RTP5Q14D33 572 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 FAM153CQ494X1 144 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 IRGCQ6NXR0 463 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 WDR93Q6P2C0 686 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 PRSS42Q7Z5A4 293 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 EEF1AKMT1Q8WVE0 214 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 ANKRD7Q92527 254 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 TGM7Q96PF1 710 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 TWSG1Q9GZX9 223 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 TMEM9Q9P0T7 183 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 SPATA7Q9P0W8 599 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 SEMA5BQ9P283 1151 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 PCDHGA8Q9Y5G5 932 aa12.85□□□□□ -0.35
CKAP2-202ENST00000378034 KNTC1P50748 2209 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 C2orf74A8MZ97 194 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 MAP4P27816 1152 aaKnown RBP12.84□□□□□ -0.35
CKAP2-202ENST00000378034 PKLRP30613 574 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 HSD17B2P37059 387 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 LSSP48449 732 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 GFERP55789 205 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 USP10Q14694 798 aaKnown RBP12.84□□□□□ -0.35
CKAP2-202ENST00000378034 IGF2-ASQ6U949 168 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 RAB11FIP2Q7L804 512 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 MARCH9Q86YJ5 346 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 ADGRF3Q8IZF5 1079 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 LSMEM2Q8N112 164 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 AGBL5Q8NDL9 886 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 NXPE2Q96DL1 559 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 LINGO1Q96FE5 620 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 MENTQ9BUN1 341 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 POLR1BQ9H9Y6 1135 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 LNPEPQ9UIQ6 1025 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 SLC39A10Q9ULF5 831 aa12.84□□□□□ -0.35
CKAP2-202ENST00000378034 TRABD2BA6NFA1 517 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 TLCD2A6NGC4 264 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 ARHGEF33A8MVX0 844 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 MYO1CO00159 1063 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 BTN3A3O00478 584 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 BTN3A1O00481 513 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 RIPK2O43353 540 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 TSPAN12O95859 305 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 TUBBP07437 444 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 ITGA2BP08514 1039 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 MYBL2P10244 700 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 STMN1P16949 149 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 ZNF37AP17032 561 aaPredicted RBP12.83□□□□□ -0.35
CKAP2-202ENST00000378034 POLR2CP19387 275 aaPredicted RBP12.83□□□□□ -0.35
CKAP2-202ENST00000378034 SAT1P21673 171 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 CSTF2P33240 577 aaKnown RBP eCLIP12.83□□□□□ -0.35
CKAP2-202ENST00000378034 BDKRB1P46663 353 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 KIR2DS3Q14952 304 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 ARHGAP19Q14CB8 494 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 EFTUD2Q15029 972 aaKnown RBP eCLIP12.83□□□□□ -0.351e-7■■■■■ 27.1
CKAP2-202ENST00000378034 PIWIL4Q7Z3Z4 852 aaKnown RBP12.83□□□□□ -0.35
CKAP2-202ENST00000378034 CCDC91Q7Z6B0 441 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 KMT5CQ86Y97 462 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 FBXO39Q8N4B4 442 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 OR9A1PQ8NGU1 263 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 OR2L8Q8NGY9 312 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 HMGCLL1Q8TB92 370 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 SLC44A1Q8WWI5 657 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms