RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 PI4K2AQ9BTU6 479 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 EFCAB9A8MZ26 197 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CCNKO75909 580 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CD2P06729 351 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 VARSP26640 1264 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 BHLHE41Q9C0J9 482 aaPredicted RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 IL5RAQ01344 420 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ZYXQ15942 572 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SOWAHAQ2M3V2 549 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 LLGL2Q6P1M3 1020 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF566Q969W8 418 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 FBXO6Q9NRD1 293 aaPredicted RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM184CQ9NVA4 438 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CAPN8A6NHC0 703 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 KDELR3O43731 214 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MTHFRP42898 656 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 RGS7P49802 495 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ALKAL1Q6UXT8 129 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 UBA3Q8TBC4 463 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 GPR151Q8TDV0 419 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 IFT27Q9BW83 186 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CHRAC1Q9NRG0 131 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 DCAF13Q9NV06 445 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF780BQ9Y6R6 833 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CTSKP43235 329 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 OR5T2Q8NGG2 359 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 PHF12Q96QT6 1004 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CRTAC1Q9NQ79 661 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 GPR34Q9UPC5 381 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 FAM240BA0A1B0GVZ2 78 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MAGEB17A8MXT2 336 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ADH1AP07327 375 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MRPS6P82932 125 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CIDECQ96AQ7 238 aaPredicted RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 AGPAT4Q9NRZ5 378 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ANGPTL1O95841 491 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ADIGQ0VDE8 80 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 TDGQ13569 410 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 HMGN3Q15651 99 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 QPCTQ16769 361 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ALFQ53S48 1182 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 PAOXQ6QHF9 649 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 BMFQ96LC9 184 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ZSWIM3Q96MP5 696 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 MARCOQ9UEW3 520 aaPredicted RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 AGO1Q9UL18 857 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 STON1Q9Y6Q2 735 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 RNASET2O00584 256 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 CLTBP09497 229 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 CTXN3Q4LDR2 81 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 C5orf46Q6UWT4 87 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF367Q7RTV3 350 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SIAH1Q8IUQ4 282 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SYT12Q8IV01 421 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 DOHHQ9BU89 302 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 A0A1W2PPM1 405 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 MCIDASD6RGH6 385 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 INSIG1O15503 277 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 PDPK1O15530 556 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SSBP1Q04837 148 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 MAB21L1Q13394 359 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SYT6Q5T7P8 510 aaPredicted RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 NAPRTQ6XQN6 538 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 LARP4Q71RC2 724 aaKnown RBP eCLIP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 GLT6D1Q7Z4J2 308 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ISOC1Q96CN7 298 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 BRINP2Q9C0B6 783 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 CASC3O15234 703 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 VNN1O95497 513 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 DAOAP59103 153 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 RHOAP61586 193 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 ITGA7Q13683 1181 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 GALNT3Q14435 633 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 IDNKQ5T6J7 187 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 FBXO15Q8NCQ5 510 aaPredicted RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 DNAJC11Q9NVH1 559 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 LOC285095A0A1B0GVY8 99 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SLC4A1P02730 911 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 RAF1P04049 648 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 MYL9P24844 172 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 MLH1P40692 756 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 BTNL2Q9UIR0 455 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 BCKDKO14874 412 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 UBXN7O94888 489 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 XRCC1P18887 633 aaPredicted RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 IBSPP21815 317 aaPredicted RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 RELAQ04206 551 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SMTNL2Q2TAL5 461 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 MACC1Q6ZN28 852 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 PCDH20Q8N6Y1 951 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 NTSP30990 170 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 PFKPQ01813 784 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SLITRK4Q8IW52 837 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 CPOXP36551 454 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 YAP1P46937 504 aaKnown RBP4.84□□□□□ -1.63
PCDH9-201ENST00000377861 BLKP51451 505 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 RSU1Q15404 277 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 SLC36A3Q495N2 470 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 LCN1P1Q5VSP4 162 aa4.84□□□□□ -1.63
PCDH9-201ENST00000377861 FAM83DQ9H4H8 585 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms