RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 KCTD11Q693B1 232 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 ROGDIQ9GZN7 287 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 B4GALT3O60512 393 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 PAK4O96013 591 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-202ENST00000377797 CTSOP43234 321 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-202ENST00000377797 MTPNP58546 118 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 SLBPQ14493 270 aaKnown RBP eCLIP14.2□□□□□ -0.14
TCOF1-202ENST00000377797 TTC23Q5W5X9 447 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 SLC30A9Q6PML9 568 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 SHKBP1Q8TBC3 707 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 EFCAB11Q9BUY7 163 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 NKX2-4Q9H2Z4 354 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 TREX1Q9NSU2 369 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 VPS29Q9UBQ0 182 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 U3KQV3 271 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 SDHDO14521 159 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 XRCC1P18887 633 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-202ENST00000377797 FOLH1Q04609 750 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 PPP1R3AQ16821 1122 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 ENPP7Q6UWV6 458 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 PIANPQ8IYJ0 282 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 CPXM2Q8N436 756 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 C10orf53Q8N6V4 93 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 ADCY4Q8NFM4 1077 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 C3orf18Q9UK00 162 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 RAB23Q9ULC3 237 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 RNF11Q9Y3C5 154 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 CCNDBP1O95273 360 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 NCK1P16333 377 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 SERPINB10P48595 397 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 DGKQP52824 942 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 ARF5P84085 180 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 CRTC1Q6UUV9 634 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 GAREM2Q75VX8 874 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 SETD9Q8NE22 299 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 PHOSPHO2Q8TCD6 241 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 APOL4Q9BPW4 351 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 MCMBPQ9BTE3 642 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 BOCQ9BWV1 1114 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 CD244Q9BZW8 370 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 MRPS17Q9Y2R5 130 aaKnown RBP14.2□□□□□ -0.14
TCOF1-202ENST00000377797 SAMHD1Q9Y3Z3 626 aaKnown RBP14.2□□□□□ -0.14
TCOF1-202ENST00000377797 FAM149AA5PLN7 773 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 ABLIM3O94929 683 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 ENO2P09104 434 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 SPINT3P49223 89 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 EIF2B5Q13144 721 aaKnown RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 RUNX3Q13761 415 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 UBXN2BQ14CS0 331 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 APLFQ8IW19 511 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 SRFBP1Q8NEF9 429 aaKnown RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 IL26Q9NPH9 171 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 KRT84Q9NSB2 600 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 RIMKLBQ9ULI2 386 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 NUP205Q92621 2012 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 G3V2L1 256 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 SUV39H1O43463 412 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 TSPAN6O43657 245 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 SNNO75324 88 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 OAS1P00973 400 aaKnown RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 CHN2P52757 468 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 PLA2G16P53816 162 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 OR4D1Q15615 310 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 CCDC85BQ15834 202 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 ZNF648Q5T619 568 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 WDR60Q8WVS4 1066 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 EXOSC8Q96B26 276 aaKnown RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 NMD3Q96D46 503 aaKnown RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 MYRFLQ96LU7 910 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 SAP18O00422 153 aaKnown RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 LIN7AO14910 233 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 AP2A2O94973 939 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 F11P03951 625 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 CMPK1P30085 196 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 HOXC13P31276 330 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 MTHFRP42898 656 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 EPS8Q12929 822 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 ADCK1Q86TW2 530 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 THOC6Q86W42 341 aaKnown RBP14.19□□□□□ -0.14
TCOF1-202ENST00000377797 MDGA1Q8NFP4 955 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 OR13J1Q8NGT2 312 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 PCBD2Q9H0N5 130 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 TBX21Q9UL17 535 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 ARFGEF1Q9Y6D6 1849 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 hCG_2014768A0A024R1R8 64 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 GRXCR1A8MXD5 290 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 TBX10O75333 385 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 TGFB1P01137 390 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 AKT2P31751 481 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 C9orf64Q5T6V5 341 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 ARMC7Q9H6L4 198 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 GULP1Q9UBP9 304 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 TEKT2Q9UIF3 430 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 DUSP12Q9UNI6 340 aa14.19□□□□□ -0.14
TCOF1-202ENST00000377797 MUSKO15146 869 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 EBLN1P0CF75 366 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 PCSK2P16519 638 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 CEBPBP17676 345 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 MAGEA3P43357 314 aa14.18□□□□□ -0.14
TCOF1-202ENST00000377797 IDH2P48735 452 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms