RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 KRT222Q8N1A0 295 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 STARD8Q92502 1023 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 ZNF501Q96CX3 271 aaPredicted RBP16.3■□□□□ 0.2
HMGN4-201ENST00000377575 MED8Q96G25 268 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 PPM1MQ96MI6 270 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 LATS2Q9NRM7 1088 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 CROTQ9UKG9 612 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 CDYLQ9Y232 598 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 COL6A6A6NMZ7 2263 aa16.3■□□□□ 0.2
HMGN4-201ENST00000377575 PIEZO2Q9H5I5 2752 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 USP27XA6NNY8 438 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 GOLGA8KD6RF30 607 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 H3BMM5 538 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 GOLGA8TH3BQL2 631 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 SCRG1O75711 98 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 C1QL1O75973 258 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 SLCO2B1O94956 709 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 TIAF1O95411 115 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 CHRM5P08912 532 aaPredicted RBP16.29■□□□□ 0.2
HMGN4-201ENST00000377575 MSL3P1P0C860 447 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 ST6GAL1P15907 406 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 CDC20Q12834 499 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 DHX34Q14147 1143 aaKnown RBP16.29■□□□□ 0.2
HMGN4-201ENST00000377575 TBR1Q16650 682 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 BORAQ6PGQ7 559 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 FBXO38Q6PIJ6 1188 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 UNC5AQ6ZN44 842 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 VRK3Q8IV63 474 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 PPIL6Q8IXY8 311 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 LPGAT1Q92604 370 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 ZNF669Q96BR6 464 aaPredicted RBP16.29■□□□□ 0.2
HMGN4-201ENST00000377575 RNF31Q96EP0 1072 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 KCND1Q9NSA2 647 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 ASIC3Q9UHC3 531 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 KCND3Q9UK17 655 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 PADI1Q9ULC6 663 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 MRFAP1Q9Y605 127 aa16.29■□□□□ 0.2
HMGN4-201ENST00000377575 ESR1P03372 595 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 UGT2B7P16662 529 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 RAB28P51157 221 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 ADARP55265 1226 aaKnown RBP16.28■□□□□ 0.2
HMGN4-201ENST00000377575 GNG11P61952 73 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 COL9A2Q14055 689 aaPredicted RBP16.28■□□□□ 0.2
HMGN4-201ENST00000377575 LINC00303Q3SY05 128 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 ANKRD20A4Q4UJ75 823 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 CRTC2Q53ET0 693 aaPredicted RBP16.28■□□□□ 0.2
HMGN4-201ENST00000377575 CTSL3PQ5NE16 218 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 PLEKHS1Q5SXH7 462 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 NEPROQ6NW34 567 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 CILP2Q8IUL8 1156 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 ZNF843Q8N446 348 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 NAT8LQ8N9F0 302 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 CFAP61Q8NHU2 1237 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 SKA2Q8WVK7 121 aaPredicted RBP16.28■□□□□ 0.2
HMGN4-201ENST00000377575 SLCO2A1Q92959 643 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 TRAPPC9Q96Q05 1148 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 NAPGQ99747 312 aaPredicted RBP16.28■□□□□ 0.2
HMGN4-201ENST00000377575 NRTNQ99748 197 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 RAB11FIP5Q9BXF6 653 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 DDX47Q9H0S4 455 aaKnown RBP16.28■□□□□ 0.2
HMGN4-201ENST00000377575 LHX9Q9NQ69 397 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 INTS10Q9NVR2 710 aaKnown RBP16.28■□□□□ 0.2
HMGN4-201ENST00000377575 IL17BQ9UHF5 180 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 PLAGL1Q9UM63 463 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 PCDHB3Q9Y5E6 796 aa16.28■□□□□ 0.2
HMGN4-201ENST00000377575 A0A0J9YY10 115 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 C21orf140B9A014 251 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 TMEM150CB9EJG8 249 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 USP1O94782 785 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 PRKAR1AP10644 381 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 SFTPCP11686 197 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 TCN2P20062 427 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 PKLRP30613 574 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 FMO4P31512 558 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 MAGEA3P43357 314 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 ABRQ12979 859 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 THOC5Q13769 683 aaKnown RBP16.27■□□□□ 0.2
HMGN4-201ENST00000377575 PTK6Q13882 451 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 KIR2DS3Q14952 304 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 KYNUQ16719 465 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 RNASEH2BQ5TBB1 312 aaKnown RBP16.27■□□□□ 0.2
HMGN4-201ENST00000377575 ZNF470Q6ECI4 717 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 TTC23LQ6PF05 361 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 PCGF5Q86SE9 256 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 TMEM135Q86UB9 458 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 RAB42Q8N4Z0 105 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 C19orf47Q8N9M1 422 aaKnown RBP16.27■□□□□ 0.2
HMGN4-201ENST00000377575 N4BP2L2Q92802 583 aaPredicted RBP16.27■□□□□ 0.2
HMGN4-201ENST00000377575 FOPNLQ96NB1 174 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 RUNDC3BQ96NL0 473 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 BIRC8Q96P09 236 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 OR2A14Q96R47 310 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 PCYOX1Q9UHG3 505 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 PCDHGA6Q9Y5G7 932 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 MAD1L1Q9Y6D9 718 aa16.27■□□□□ 0.2
HMGN4-201ENST00000377575 CTAGE9A4FU28 777 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 ISM1B1AKI9 464 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 E5RI56 91 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 NTRK1P04629 796 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 PVRP15151 417 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms