RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 BLOC1S5Q8TDH9 187 aa12.74□□□□□ -0.37
CLCN6-205ENST00000376492 INPP5DQ92835 1189 aa12.74□□□□□ -0.37
CLCN6-205ENST00000376492 LRRC45Q96CN5 670 aa12.74□□□□□ -0.37
CLCN6-205ENST00000376492 C12orf66Q96MD2 445 aa12.74□□□□□ -0.37
CLCN6-205ENST00000376492 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLCN6-205ENST00000376492 SLC24A2Q9UI40 661 aa12.74□□□□□ -0.37
CLCN6-205ENST00000376492 SRPK3Q9UPE1 567 aa12.74□□□□□ -0.37
CLCN6-205ENST00000376492 ZNF148Q9UQR1 794 aa12.74□□□□□ -0.37
CLCN6-205ENST00000376492 B3GNT3Q9Y2A9 372 aa12.74□□□□□ -0.37
CLCN6-205ENST00000376492 NTNG1Q9Y2I2 539 aa12.74□□□□□ -0.37
CLCN6-205ENST00000376492 OTOGQ6ZRI0 2925 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 MASP2O00187 686 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 BUD23O43709 281 aaKnown RBP12.73□□□□□ -0.37
CLCN6-205ENST00000376492 KCNJ13O60928 360 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 PRF1P14222 555 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 CXCR5P32302 372 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 SPAM1P38567 509 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 OLIG2Q13516 323 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 SNX1Q13596 522 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 TAF1AQ15573 450 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-205ENST00000376492 FNBP1LQ5T0N5 605 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 GPRC6AQ5T6X5 926 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 GLT6D1Q7Z4J2 308 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 MRGPREQ86SM8 312 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 CREG2Q8IUH2 290 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 DDHD1Q8NEL9 900 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 NRTNQ99748 197 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 C19orf43Q9BQ61 176 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 TBL1YQ9BQ87 522 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 APOL2Q9BQE5 337 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 ZCCHC2Q9C0B9 1178 aaKnown RBP12.73□□□□□ -0.37
CLCN6-205ENST00000376492 KIR3DX1Q9H7L2 352 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 LRRC40Q9H9A6 602 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 ACTR5Q9H9F9 607 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-205ENST00000376492 FANCEQ9HB96 536 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 HOMER3Q9NSC5 361 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 POMT2Q9UKY4 750 aa12.73□□□□□ -0.37
CLCN6-205ENST00000376492 ERI2A8K979 691 aaKnown RBP12.72□□□□□ -0.37
CLCN6-205ENST00000376492 GAPDHSO14556 408 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-205ENST00000376492 AP2A1O95782 977 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 CYP2A7P20853 494 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 CDH3P22223 829 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 LMAN1P49257 510 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 FOXL2P58012 376 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 SPARCL1Q14515 664 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 LONRF2Q1L5Z9 754 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 CRB2Q5IJ48 1285 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 LDLRAP1Q5SW96 308 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 METRNLQ641Q3 311 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 CARFQ8N187 725 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 LILRA3Q8N6C8 439 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-205ENST00000376492 OR4E2Q8NGC2 313 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 RMDN2Q96LZ7 410 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 ILKAPQ9H0C8 392 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-205ENST00000376492 KLHL25Q9H0H3 589 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 C5AR2Q9P296 337 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 PKP3Q9Y446 797 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 ARL5AQ9Y689 179 aa12.72□□□□□ -0.37
CLCN6-205ENST00000376492 FBN2P35556 2912 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 GLYATL1P3A0A0U1RQE8 302 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 ARHGAP10A1A4S6 786 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 GSAPA4D1B5 854 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 C2orf81A6NN90 581 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 CCDC188H7C350 402 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 STX7O15400 261 aaKnown RBP12.71□□□□□ -0.37
CLCN6-205ENST00000376492 KLF7O75840 302 aaPredicted RBP12.71□□□□□ -0.37
CLCN6-205ENST00000376492 SLU7O95391 586 aaKnown RBP12.71□□□□□ -0.37
CLCN6-205ENST00000376492 CRTAMO95727 393 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 IFNB1P01574 187 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 TUBBP07437 444 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 SLC35G4P0C7Q5 338 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 PVRP15151 417 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 ST6GAL1P15907 406 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 FDFT1P37268 417 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 PREPP48147 710 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 ELOAQ14241 798 aaKnown RBP12.71□□□□□ -0.37
CLCN6-205ENST00000376492 PTPRCAPQ14761 206 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 ZNF385CQ66K41 422 aaPredicted RBP12.71□□□□□ -0.37
CLCN6-205ENST00000376492 C4orf22Q6V702 233 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 CUZD1Q86UP6 607 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 RAB43Q86YS6 212 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 TMEM151BQ8IW70 566 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 PRELID2Q8N945 189 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 RUNDC3BQ96NL0 473 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 BARD1Q99728 777 aaKnown RBP12.71□□□□□ -0.37
CLCN6-205ENST00000376492 ETNK1Q9HBU6 452 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 ZBTB20Q9HC78 741 aaPredicted RBP12.71□□□□□ -0.37
CLCN6-205ENST00000376492 PAK5Q9P286 719 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 PCDHGA10Q9Y5H3 936 aa12.71□□□□□ -0.37
CLCN6-205ENST00000376492 COPG1Q9Y678 874 aaKnown RBP12.71□□□□□ -0.37
CLCN6-205ENST00000376492 DNMT3AQ9Y6K1 912 aaPredicted RBP12.71□□□□□ -0.37
CLCN6-205ENST00000376492 MGAT4DA6NG13 374 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 EFCAB8A8MWE9 144 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 C9J4A7 227 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 PGRMC1O00264 195 aaKnown RBP12.7□□□□□ -0.38
CLCN6-205ENST00000376492 ZNF749O43361 778 aa12.7□□□□□ -0.38
CLCN6-205ENST00000376492 LDB2O43679 373 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms