RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 RFC2P35250 354 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 GSK3BP49841 420 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 TCEAL5Q5H9L2 206 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 DET1Q7L5Y6 550 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 ELMOD2Q8IZ81 293 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 SIMC1Q8NDZ2 872 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 FAM46DQ8NEK8 389 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 AKAP1Q92667 903 aaKnown RBP eCLIP8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 TCEAL4Q96EI5 215 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 PPP1R16BQ96T49 567 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 VRK1Q99986 396 aaPredicted RBP8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 HERC2P3Q9BVR0 1158 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 POLR2J3Q9H1A7 115 aaKnown RBP8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 WDR55Q9H6Y2 383 aaPredicted RBP8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 MYNNQ9NPC7 610 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 PCDH10Q9P2E7 1040 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 PLCL2Q9UPR0 1127 aa8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 OAS3Q9Y6K5 1087 aaKnown RBP8.67□□□□□ -1.02
SHROOM4-202ENST00000376020 GMPRP36959 345 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 GID4Q8IVV7 300 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ZNF567Q8N184 647 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 OR13J1Q8NGT2 312 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SEMA4DQ92854 862 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 TCEAL3Q969E4 200 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 FBXL21Q9UKT6 434 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 AP2A2O94973 939 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 PRAMEF12O95522 483 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SERPIND1P05546 499 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 MATN1P21941 496 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ENTPD1P49961 510 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 GTF2H2Q13888 395 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 GNASQ5JWF2 1037 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 GTF2H2CQ6P1K8 395 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ANKRD23Q86SG2 305 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 TRIM48Q8IWZ4 208 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 FDXACB1Q9BRP7 624 aaPredicted RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 POTEKPQ9BYX7 375 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 INTS7Q9NVH2 962 aaKnown RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SOBPA7XYQ1 873 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 I3L521 148 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 CBX5P45973 191 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 RELAQ04206 551 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 CFAP206Q8IYR0 622 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ASB13Q8WXK3 278 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 DHRS4Q9BTZ2 278 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 RAB11FIP5Q9BXF6 653 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 TMEM39BQ9GZU3 492 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 PIF1Q9H611 641 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 NAP1L6A6NFF2 107 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 PLD2O14939 933 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 KLHL18O94889 574 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ZNF806P0C7X5 589 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 CD47Q08722 323 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SLC35F1Q5T1Q4 408 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 C9orf57Q5W0N0 161 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ABHD15Q6UXT9 468 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ADAM32Q8TC27 787 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 MOAP1Q96BY2 351 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 MED30Q96HR3 178 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 MIPEPQ99797 713 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 CCDC3Q9BQI4 270 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SLC2A11Q9BYW1 496 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 PAK1IP1Q9NWT1 392 aaPredicted RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 TMEM5Q9Y2B1 443 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 OTOFQ9HC10 1997 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 NME6O75414 186 aaPredicted RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SCGNO76038 276 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 RLN1P04808 185 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 USP17L7P0C7H9 530 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 PRKAR2AP13861 404 aaKnown RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 LSM3P62310 102 aaKnown RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 C2orf80Q0P641 193 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 TLR1Q15399 786 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SMAD1Q15797 465 aaKnown RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 CELF3Q5SZQ8 465 aaKnown RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SENP8Q96LD8 212 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 AIF1LQ9BQI0 150 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 RASSF1Q9NS23 344 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SMIM35A0A1B0GVV1 85 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 TSPAN4O14817 238 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 BOP1Q14137 746 aaKnown RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SLC25A24Q6NUK1 477 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ZNF730Q6ZMV8 503 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 UBQLNLQ8IYU4 475 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 PHACTR4Q8IZ21 702 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 C10orf53Q8N6V4 93 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ZNF248Q8NDW4 579 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ZNF548Q8NEK5 533 aaPredicted RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 PCDH19Q8TAB3 1148 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 FARSBQ9NSD9 589 aaKnown RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 GPATCH2LQ9NWQ4 482 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 NFKBIL1Q9UBC1 381 aaPredicted RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 LRG1P02750 347 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 NPR2P20594 1047 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 HOXD12P35452 270 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 ARL2P36404 184 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 MRPS10P82664 201 aaKnown RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 SLC25A11Q02978 314 aaKnown RBP8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 CTBP1Q13363 440 aa8.66□□□□□ -1.02
SHROOM4-202ENST00000376020 KEAP1Q14145 624 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms