RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 FARSBQ9NSD9 589 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 VNN3Q9NY84 501 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 USE1Q9NZ43 259 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 NLRC5Q86WI3 1866 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 TTC36A6NLP5 189 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 PRMT5O14744 637 aaPredicted RBP13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 MAPKAPK3Q16644 382 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 SGO1Q5FBB7 561 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 ZRANB3Q5FWF4 1079 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 SPANXN4Q5MJ08 99 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF362Q5T0B9 420 aaPredicted RBP13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 TTC30BQ8N4P2 665 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 ATP6V0D2Q8N8Y2 350 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 CLHC1Q8NHS4 586 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 NETO1Q8TDF5 533 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 SPON2Q9BUD6 331 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 YIPF2Q9BWQ6 316 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 WDR12Q9GZL7 423 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 SCML2Q9UQR0 700 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 COMMD10Q9Y6G5 202 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 SCN5AQ14524 2016 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 MYO16Q9Y6X6 1858 aa13.84□□□□□ -0.19
CLCNKA-202ENST00000375692 SLC12A8A0AV02 714 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 GRXCR2A6NFK2 248 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 BCKDKO14874 412 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 GUCA1CO95843 209 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 GSTT2P0CG29 244 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 GSTT2BP0CG30 244 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 TGM1P22735 817 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 MC4RP32245 332 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 NCS1P62166 190 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 FAM189BP81408 668 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 VAC14Q08AM6 782 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 TOP3AQ13472 1001 aaPredicted RBP13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 PARP15Q460N3 678 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 PRR23BQ6ZRT6 265 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 FRA10AC1Q70Z53 315 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 ANKRD33Q7Z3H0 272 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 EID3Q8N140 333 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 SVOPLQ8N434 492 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 EFHBQ8N7U6 833 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 ARL10Q8N8L6 244 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 GIPC2Q8TF65 315 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 RORBQ92753 470 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 CCDC97Q96F63 343 aaPredicted RBP13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF641Q96N77 438 aaPredicted RBP13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 KLQ9UEF7 1012 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 C3orf18Q9UK00 162 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 INTS6Q9UL03 887 aaKnown RBP13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 NAALAD2Q9Y3Q0 740 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 PCDHGC4Q9Y5F7 938 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 ANKRD36A6QL64 1941 aa13.83□□□□□ -0.19
CLCNKA-202ENST00000375692 DRGXA6NNA5 263 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 E5RI56 91 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 GABARAPO95166 117 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 ANGPTL1O95841 491 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 SERPINA1P01009 418 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 COL6A1P12109 1028 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 ITGB8P26012 769 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 GDF5P43026 501 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 EPS8Q12929 822 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 GTF2H2Q13888 395 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 NPTX1Q15818 432 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 C10orf120Q5SQS8 335 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 GTF2H2CQ6P1K8 395 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 ZCCHC7Q8N3Z6 543 aaKnown RBP13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 LPCAT1Q8NF37 534 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 OR5K1Q8NHB7 308 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 VMP1Q96GC9 406 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 CORO1BQ9BR76 489 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 KLHL25Q9H0H3 589 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 IPPKQ9H8X2 491 aa13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 PNMA8BQ9ULN7 279 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 GPC6Q9Y625 555 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-202ENST00000375692 CREG1O75629 220 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 B3GALT4O96024 378 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 PRLP01236 227 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 GSNP06396 782 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 HSPA7P48741 367 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 CARTPTQ16568 116 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 SMN1Q16637 294 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 LRRC26Q2I0M4 334 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 NADSYN1Q6IA69 706 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 TAS2R42Q7RTR8 314 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 B3GNT8Q7Z7M8 397 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 ADCK1Q86TW2 530 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 CYP4Z1Q86W10 505 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 ADHFE1Q8IWW8 467 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 RPL3LQ92901 407 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 VWCEQ96DN2 955 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 PDFQ9HBH1 243 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 MARCH2Q9P0N8 246 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 KIAA1522Q9P206 1035 aaPredicted RBP13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 VPS51Q9UID3 782 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 CCL27Q9Y4X3 112 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 PCDHB14Q9Y5E9 798 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 PCDHGA10Q9Y5H3 936 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 C2orf81A6NN90 581 aa13.82□□□□□ -0.2
CLCNKA-202ENST00000375692 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms