RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 PSMA6P60900 246 aaKnown RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 SNRPD1P62314 119 aaKnown RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 CRHR2Q13324 411 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 CRMP1Q14194 572 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 VRK2Q86Y07 508 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 DENND1CQ8IV53 801 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 GOT1L1Q8NHS2 421 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 KLK6Q92876 244 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ZNF764Q96H86 408 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 WNT8AQ9H1J5 351 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 KCNF1Q9H3M0 494 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 SLC40A1Q9NP59 571 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 C14orf105Q9NVL8 296 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 RAB21Q9UL25 225 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 AP3M1Q9Y2T2 418 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ST14Q9Y5Y6 855 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ABCC12Q96J65 1359 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 GRIN2BQ13224 1484 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 EFCAB9A8MZ26 197 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PPP1R3GB7ZBB8 358 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 F8VZ95 297 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 IFNA5P01569 189 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 AHSGP02765 367 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PLK1P53350 603 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 MAXP61244 160 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 RAC1P63000 192 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ECT2LQ008S8 904 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 TATDN3Q17R31 274 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 SYT16Q17RD7 645 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ZCWPW2Q504Y3 356 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ATAT1Q5SQI0 421 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 MSANTD2Q6P1R3 559 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ERI1Q8IV48 349 aaKnown RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 TCTE3Q8IZS6 198 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 NOA1Q8NC60 698 aaKnown RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 TBC1D16Q8TBP0 767 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 STT3BQ8TCJ2 826 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ACTRT2Q8TDY3 377 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 STK32AQ8WU08 396 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 NCSTNQ92542 709 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ZUFSPQ96AP4 578 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 EAF2Q96CJ1 260 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PTPN18Q99952 460 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 NUDT9Q9BW91 350 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 BPIFA1Q9NP55 256 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ITGA11Q9UKX5 1188 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 CA14Q9ULX7 337 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 EMSYQ7Z589 1322 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PRAMEF33A0A0G2JMD5 474 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 TMEM218A2RU14 115 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 FOXN1O15353 648 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PRAMEF10O60809 474 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 VTNP04004 478 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PFKLP17858 780 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ATP5A1P25705 553 aaKnown RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 L1CAMP32004 1257 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 GABRA2P47869 451 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 GSK3AP49840 483 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ZNF132P52740 706 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 EPHA4P54764 986 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 CCL23P55773 120 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 OR12D2P58182 307 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PTGISQ16647 500 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 MOB1BQ7L9L4 216 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 S100A7AQ86SG5 101 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 GPR180Q86V85 440 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 DAGLBQ8NCG7 672 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PHC3Q8NDX5 983 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 CEP76Q8TAP6 659 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 DCAKDQ8WVC6 231 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 JPH3Q8WXH2 748 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ACBD6Q9BR61 282 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ZNF701Q9NV72 531 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PADI1Q9ULC6 663 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 TMED5Q9Y3A6 229 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 UTYO14607 1347 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 IRS2Q9Y4H2 1338 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PLSCR5A0PG75 271 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PRAMEF22A3QJZ6 481 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 C19orf81C9J6K1 198 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 BMPR1BO00238 502 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 CREBL2O60519 120 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ATG13O75143 517 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 PAPSS2O95340 614 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 C22orf31O95567 290 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ONECUT2O95948 504 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 MT-CO2P00403 227 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 NR3C1P04150 777 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 SMIM17P0DL12 118 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 UCHL3P15374 230 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ADH6P28332 368 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 DPP6P42658 865 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 RNF144AP50876 292 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-202ENST00000375405 FXYD6P3P58550 94 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 ZNF33AQ06730 810 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 DDR1Q08345 913 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 NFATC2Q13469 925 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 DGKZQ13574 1117 aa4.57□□□□□ -1.68
SCN1A-202ENST00000375405 GNMTQ14749 295 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms