RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 IL6P05231 212 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 PGRP06401 933 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 HOXB6P17509 224 aaKnown RBP20.72■□□□□ 0.91
UPF3A-202ENST00000375299 ALDH7A1P49419 539 aaKnown RBP20.72■□□□□ 0.91
UPF3A-202ENST00000375299 TTPAP49638 278 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 CLK3P49761 638 aaKnown RBP20.72■□□□□ 0.91
UPF3A-202ENST00000375299 MVKQ03426 396 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 TRAF3Q13114 568 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 SIM2Q14190 667 aaPredicted RBP20.72■□□□□ 0.91
UPF3A-202ENST00000375299 CCL14Q16627 93 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 CPZQ66K79 652 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 ATG9BQ674R7 924 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 CYP4Z1Q86W10 505 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 PSMA8Q8TAA3 256 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 PYURFQ96I23 114 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 KAT8Q9H7Z6 458 aaKnown RBP20.72■□□□□ 0.91
UPF3A-202ENST00000375299 ANKHQ9HCJ1 492 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 SARS2Q9NP81 518 aaKnown RBP20.72■□□□□ 0.91
UPF3A-202ENST00000375299 CPA4Q9UI42 421 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 OSGIN1Q9UJX0 560 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 POU2F3Q9UKI9 436 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 ERVW-1Q9UQF0 538 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 PKP3Q9Y446 797 aa20.72■□□□□ 0.91
UPF3A-202ENST00000375299 C2orf81A6NN90 581 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 E5RI56 91 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 OTCP00480 354 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 MC4RP32245 332 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 MAD2L1Q13257 205 aaPredicted RBP20.71■□□□□ 0.91
UPF3A-202ENST00000375299 CCDC80Q76M96 950 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 PLPP6Q8IY26 295 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 KCNJ9Q92806 393 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 LGALS12Q96DT0 336 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 ACOT13Q9NPJ3 140 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 ATP11BQ9Y2G3 1177 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 TRPV2Q9Y5S1 764 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 TRBV5-3A0A0A0MS03 114 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 RGS14O43566 566 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 RGS10O43665 173 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 CYP4B1P13584 511 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 PSMA3P25788 255 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 MAPKAPK2P49137 400 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 FCGRTP55899 365 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 PURAQ00577 322 aaKnown RBP20.71■□□□□ 0.91
UPF3A-202ENST00000375299 FPGSQ05932 587 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 MILR1Q7Z6M3 343 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 CALHM3Q86XJ0 350 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 PLD3Q8IV08 490 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 CHCHD4Q8N4Q1 142 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 ZNF540Q8NDQ6 660 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 POP5Q969H6 163 aaKnown RBP20.71■□□□□ 0.91
UPF3A-202ENST00000375299 MGME1Q9BQP7 344 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 IPPKQ9H8X2 491 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 VPS51Q9UID3 782 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 FKBPLQ9UIM3 349 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 ZMYM5Q9UJ78 669 aa20.71■□□□□ 0.91
UPF3A-202ENST00000375299 ISPDA4D126 451 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 GPR182O15218 404 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 UPK1BO75841 260 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 S100A1P23297 94 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 SLC39A12Q504Y0 691 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 SLC7A5P1Q8MH63 180 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 LIX1Q8N485 282 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 ZBED2Q9BTP6 218 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 CLMPQ9H6B4 373 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 C1orf109Q9NX04 203 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 ABI2Q9NYB9 513 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-202ENST00000375299 ACTL7AQ9Y615 435 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 S100BP04271 92 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-202ENST00000375299 ITGB1P05556 798 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 MAGEA2P43356 314 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 CLCN4P51793 760 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 IL1RL1Q01638 556 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 FADDQ13158 208 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 GBX1Q14549 363 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 SMU1Q2TAY7 513 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 SPRYD7Q5W111 196 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 CES5AQ6NT32 575 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 MRPL10Q7Z7H8 261 aaKnown RBP20.7■□□□□ 0.9
UPF3A-202ENST00000375299 LYSMD2Q8IV50 215 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 ZDHHC21Q8IVQ6 265 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 MCFD2Q8NI22 146 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 RPL3LQ92901 407 aaKnown RBP20.7■□□□□ 0.9
UPF3A-202ENST00000375299 FAM120BQ96EK7 910 aaKnown RBP20.7■□□□□ 0.9
UPF3A-202ENST00000375299 TXNDC15Q96J42 360 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 SMIM14Q96QK8 99 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 BARD1Q99728 777 aaKnown RBP20.7■□□□□ 0.9
UPF3A-202ENST00000375299 RHNO1Q9BSD3 238 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 CCNB1IP1Q9NPC3 277 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 GMPPBQ9Y5P6 360 aa20.7■□□□□ 0.9
UPF3A-202ENST00000375299 MRPS14O60783 128 aaKnown RBP20.69■□□□□ 0.9
UPF3A-202ENST00000375299 FAM20BO75063 409 aa20.69■□□□□ 0.9
UPF3A-202ENST00000375299 TGFBR2P37173 567 aa20.69■□□□□ 0.9
UPF3A-202ENST00000375299 GPR15P49685 360 aa20.69■□□□□ 0.9
UPF3A-202ENST00000375299 GZMMP51124 257 aa20.69■□□□□ 0.9
UPF3A-202ENST00000375299 SLC13A2Q13183 592 aa20.69■□□□□ 0.9
UPF3A-202ENST00000375299 ZRANB3Q5FWF4 1079 aa20.69■□□□□ 0.9
UPF3A-202ENST00000375299 ATAD3BQ5T9A4 648 aa20.69■□□□□ 0.9
UPF3A-202ENST00000375299 KRTCAP2Q8N6L1 136 aa20.69■□□□□ 0.9
UPF3A-202ENST00000375299 TBC1D20Q96BZ9 403 aa20.69■□□□□ 0.9
UPF3A-202ENST00000375299 MYEOVQ96EZ4 313 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms