RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 LINC00116Q8NCU8 138 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 PLD4Q96BZ4 506 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ACBD6Q9BR61 282 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 MAFBQ9Y5Q3 323 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ALG5Q9Y673 324 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 DNTTP04053 509 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 GPAT3Q53EU6 434 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 CES3Q6UWW8 571 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 THAP6Q8TBB0 222 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 SGCDQ92629 289 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 CHFRQ96EP1 664 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 GJD4Q96KN9 370 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 EVA1AQ9H8M9 152 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 POLLQ9UGP5 575 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 RICTORQ6R327 1708 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 H3BUI4 141 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 CD47Q08722 323 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 CIDECQ96AQ7 238 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ERLEC1Q96DZ1 483 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 NDC1Q9BTX1 674 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 EIF3KQ9UBQ5 218 aaKnown RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 PCDHA2Q9Y5H9 948 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 I3L521 148 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 MID1O15344 667 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 NFE2L1Q14494 772 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 TAF13Q15543 124 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 TAF1CQ15572 869 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 FAM174BQ3ZCQ3 159 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 LCN8Q6JVE9 175 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ESRP1Q6NXG1 681 aaKnown RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 LRRN1Q6UXK5 716 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 MFSD2AQ8NA29 543 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 OSBPL2Q9H1P3 480 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 TMEM199Q8N511 208 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 AVL9Q8NBF6 648 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 RERGQ96A58 199 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 TMEM80Q96HE8 168 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 TAS2R9Q9NYW1 312 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 MGAT4BQ9UQ53 548 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 TMEM5Q9Y2B1 443 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 NT5C1B-RDH14C9J2C7 533 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 C1QTNF3-AMACRE9PGA6 284 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 EIF3FO00303 357 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 PROM1O43490 865 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 EEDO75530 441 aaKnown RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 RGS8P57771 180 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 C11orf91Q3C1V1 193 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 PRSS48Q7RTY5 328 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 TSPAN33Q86UF1 283 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 AZIN2Q96A70 460 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 MARK1Q9P0L2 795 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 KIAA1522Q9P206 1035 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 TEX51A0A1B0GUA7 166 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 LCHNA4D1U4 455 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 OR6C70A6NIJ9 312 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ANXA2P2A6NMY6 339 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF432O94892 652 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ANXA2P07355 339 aaKnown RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ANXA4P09525 319 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 CYP4B1P13584 511 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 IRAK1BP1Q5VVH5 260 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 OR10A6Q8NH74 314 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ADAMTS15Q8TE58 950 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 PLEKHA6Q9Y2H5 1048 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 RIMBP3CA6NJZ7 1639 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 RIMBP3BA6NNM3 1639 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 RIMBP3Q9UFD9 1639 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 KDM3BQ7LBC6 1761 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 IRAK2O43187 625 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 RSL1D1O76021 490 aaKnown RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 PVALBP20472 110 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 CCR10P46092 362 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 GBX2P52951 348 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-204ENST00000375290 BNIP3Q12983 259 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ABHD15Q6UXT9 468 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 SLC22A16Q86VW1 577 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 RDH8Q9NYR8 311 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 HACL1Q9UJ83 578 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 FZD10Q9ULW2 581 aa10.01□□□□□ -0.81
PTCH1-204ENST00000375290 ARFGEF2Q9Y6D5 1785 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 B8ZZF3 427 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 PLD2O14939 933 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 PPM1AP35813 382 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 CPSF6Q16630 551 aaKnown RBP eCLIP10□□□□□ -0.81
PTCH1-204ENST00000375290 KLHL26Q53HC5 615 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 C11orf96Q7Z7L8 435 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 JAZF1Q86VZ6 243 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 POTEKPQ9BYX7 375 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 POLR2J3Q9H1A7 115 aaKnown RBP10□□□□□ -0.81
PTCH1-204ENST00000375290 TBC1D14Q9P2M4 693 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 GLYATL1P3A0A0U1RQE8 302 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 RFPL2O75678 378 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 LAMP2P13473 410 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 RHBDL3P58872 404 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 KLF1Q13351 362 aaPredicted RBP10□□□□□ -0.81
PTCH1-204ENST00000375290 KEAP1Q14145 624 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 TFAP2DQ7Z6R9 452 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 RPLP0P6Q8NHW5 317 aa10□□□□□ -0.81
PTCH1-204ENST00000375290 AARSD1Q9BTE6 412 aaKnown RBP10□□□□□ -0.81
PTCH1-204ENST00000375290 MOCS1Q9NZB8 636 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms