RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 RAB20Q9NX57 234 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 TAB2Q9NYJ8 693 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 NCKIPSDQ9NZQ3 722 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 LRFN1Q9P244 771 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 GTF3C4Q9UKN8 822 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 CDH9Q9ULB4 789 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 MYO6Q9UM54 1294 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 THADAQ6YHU6 1953 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 GON4LQ3T8J9 2241 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 MUC3AQ02505 3323 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 CLUHO75153 1309 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 BECN2A8MW95 431 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 ACOT8O14734 319 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 TACC1O75410 805 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 CALCAP01258 141 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 ATP1A3P13637 1013 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 CCDC130P13994 396 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 PKMP14618 531 aaKnown RBP4.51□□□□□ -1.69
PMS1-202ENST00000374826 ARSBP15848 533 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 GJA1P17302 382 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 BDNFP23560 247 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 CYP2F1P24903 491 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 GSTM2P28161 218 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 ADORA2BP29275 332 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 SERPINA4P29622 427 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 MTHFRP42898 656 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 ENTPD1P49961 510 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 CDK18Q07002 472 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 INCA1Q0VD86 236 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 CUL2Q13617 745 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 KRT31Q15323 416 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 TCP11X2Q5H9J9 407 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 VWA5B1Q5TIE3 1220 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 DGAT2L7PQ6IED9 249 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 GJB7Q6PEY0 223 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 TRIM65Q6PJ69 517 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 RINLQ6ZS11 566 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 TRILQ7L0X0 811 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 RRAGAQ7L523 313 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 CAMK1DQ8IU85 385 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 SPATA2LQ8IUW3 424 aaPredicted RBP4.51□□□□□ -1.69
PMS1-202ENST00000374826 SCN4BQ8IWT1 228 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 DHX40Q8IX18 779 aaKnown RBP4.51□□□□□ -1.69
PMS1-202ENST00000374826 CMASQ8NFW8 434 aaPredicted RBP4.51□□□□□ -1.69
PMS1-202ENST00000374826 LMO3Q8TAP4 145 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 SPATA18Q8TC71 538 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 SPPL2BQ8TCT7 592 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 HDAC7Q8WUI4 952 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 NUDCD2Q8WVJ2 157 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 SUSD6Q92537 303 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 NEUROG1Q92886 237 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 JAKMIP2Q96AA8 810 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 ARRDC3Q96B67 414 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 TCEAL4Q96EI5 215 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 PCED1BQ96HM7 432 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 ACBD6Q9BR61 282 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 TUBGCP2Q9BSJ2 902 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 MED10Q9BTT4 135 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 DCLK3Q9C098 648 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 ELOVL4Q9GZR5 314 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 NAT10Q9H0A0 1025 aaKnown RBP4.51□□□□□ -1.69
PMS1-202ENST00000374826 HSD3B7Q9H2F3 369 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 ZNF334Q9HCZ1 680 aaPredicted RBP4.51□□□□□ -1.69
PMS1-202ENST00000374826 Q9N2J8 555 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 CISHQ9NSE2 258 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 TMEM30AQ9NV96 361 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 TMEM248Q9NWD8 314 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 ZDHHC7Q9NXF8 308 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 COQ4Q9Y3A0 265 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 NUMA1Q14980 2115 aa4.51□□□□□ -1.69
PMS1-202ENST00000374826 PLXND1Q9Y4D7 1925 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 ATP8B3O60423 1300 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 LRRK1Q38SD2 2015 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 NPIPB13A6NJU9 1138 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 NPIPB5A8MRT5 1133 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 C2CD4DB7Z1M9 353 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 NPIPB4C9JG80 1138 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 INAFM1C9JVW0 142 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 F8VP50 259 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 P4HA2O15460 535 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 RGS14O43566 566 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 SPRY3O43610 288 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 LETM1O95202 739 aaPredicted RBP4.5□□□□□ -1.69
PMS1-202ENST00000374826 HLA-DQA2P01906 255 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 HNRNPA1P09651 372 aaKnown RBP eCLIP4.5□□□□□ -1.69
PMS1-202ENST00000374826 PNMA6AP0CW24 399 aaPredicted RBP4.5□□□□□ -1.69
PMS1-202ENST00000374826 HAPLN1P10915 354 aaPredicted RBP4.5□□□□□ -1.69
PMS1-202ENST00000374826 CEBPBP17676 345 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 PTPN2P17706 415 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 CHRNB2P17787 502 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 ANXA13P27216 316 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 HOXA9P31269 272 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 TNFSF8P32971 234 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 CCR2P41597 374 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 KLK7P49862 253 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 PNLIPRP1P54315 467 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 RAD23BP54727 409 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 SELENOVP59797 346 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 EGR4Q05215 589 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 CETN1Q12798 172 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms