RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 UPK3BL2E5RIL1 263 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 LSM1O15116 133 aaKnown RBP17.89■□□□□ 0.45
RXRB-202ENST00000374685 ULK1O75385 1050 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 MATN4O95460 622 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 EN2P19622 333 aaPredicted RBP17.89■□□□□ 0.45
RXRB-202ENST00000374685 OXTRP30559 389 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 LIPEQ05469 1076 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 TBCELQ5QJ74 424 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 OGFOD2Q6N063 350 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 Q6ZNX1 250 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 KIAA2013Q8IYS2 634 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 SEPHS2Q99611 448 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 HEPHQ9BQS7 1158 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 FAM83DQ9H4H8 585 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 DMTF1Q9Y222 760 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 K7EPI3 171 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 WDR47O94967 919 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 PGM3O95394 542 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 ANXA5P08758 320 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 PRR35P0CG20 571 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 PRKG2Q13237 762 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 CAMK1Q14012 370 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 SFTPA1Q8IWL2 248 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 KRTCAP2Q8N6L1 136 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 TMEM102Q8N9M5 508 aaPredicted RBP17.88■□□□□ 0.45
RXRB-202ENST00000374685 HOPXQ9BPY8 73 aaPredicted RBP17.88■□□□□ 0.45
RXRB-202ENST00000374685 KCTD14Q9BQ13 255 aaPredicted RBP17.88■□□□□ 0.45
RXRB-202ENST00000374685 ALG2Q9H553 416 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 TRANK1O15050 2925 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 PREPP48147 710 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 GSK3BP49841 420 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 LYPLAL1Q5VWZ2 237 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 FAM109BQ6ICB4 259 aaPredicted RBP17.88■□□□□ 0.45
RXRB-202ENST00000374685 LMNTD1Q8N9Z9 388 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 OR2T34Q8NGX1 318 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 OR2T3Q8NH03 318 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 PRUNE2Q8WUY3 3088 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 ABHD8Q96I13 439 aa17.88■□□□□ 0.45
RXRB-202ENST00000374685 GPATCH1Q9BRR8 931 aaKnown RBP17.88■□□□□ 0.45
RXRB-202ENST00000374685 LINC01553A4QN01 128 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 BOLA2-SMG1P6H3BVE0 249 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 ATP1B2P14415 290 aaPredicted RBP17.87■□□□□ 0.45
RXRB-202ENST00000374685 ZFP36L2P47974 494 aaKnown RBP17.87■□□□□ 0.45
RXRB-202ENST00000374685 CLCN2P51788 898 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 POLR2LP62875 67 aaKnown RBP17.87■□□□□ 0.45
RXRB-202ENST00000374685 PPIGQ13427 754 aaKnown RBP eCLIP17.87■□□□□ 0.455e-7■■□□□ 12.2
RXRB-202ENST00000374685 DDX39BQ13838 428 aaKnown RBP17.87■□□□□ 0.45
RXRB-202ENST00000374685 ACOX1Q15067 660 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 ZNF77Q15935 545 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 CYP51A1Q16850 503 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 SULT1C3Q6IMI6 304 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 C8orf82Q6P1X6 216 aaPredicted RBP17.87■□□□□ 0.45
RXRB-202ENST00000374685 CDC26Q8NHZ8 85 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 SLC29A1Q99808 456 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 PKD2L2Q9NZM6 624 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 SLC22A14Q9Y267 594 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 C15orf38-AP3S2A0A0A6YYH1 394 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 ARPC2O15144 300 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 LRATO95237 230 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 HIST1H2AGP0C0S8 130 aaPredicted RBP17.87■□□□□ 0.45
RXRB-202ENST00000374685 HIST1H2ADP20671 130 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 SELPLGQ14242 412 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 NANOGP8Q6NSW7 305 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 ARPINQ7Z6K5 226 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 RGL4Q8IZJ4 473 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 CBARPQ8N350 705 aaPredicted RBP17.87■□□□□ 0.45
RXRB-202ENST00000374685 HIST1H2AHQ96KK5 128 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 MCCC1Q96RQ3 725 aaPredicted RBP17.87■□□□□ 0.45
RXRB-202ENST00000374685 LYSMD1Q96S90 227 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 HIST1H2AJQ99878 128 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 H2AFJQ9BTM1 129 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 NANOGQ9H9S0 305 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 SLC52A3Q9NQ40 469 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 DUS2Q9NX74 493 aaKnown RBP17.87■□□□□ 0.45
RXRB-202ENST00000374685 UBAP1Q9NZ09 502 aa17.87■□□□□ 0.45
RXRB-202ENST00000374685 LEF1Q9UJU2 399 aaPredicted RBP17.87■□□□□ 0.45
RXRB-202ENST00000374685 XYLBO75191 536 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 ATP6V1B1P15313 513 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 MSH3P20585 1137 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 DHCR24Q15392 516 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 ZXDCQ2QGD7 858 aaPredicted RBP17.86■□□□□ 0.45
RXRB-202ENST00000374685 PTCHD3Q3KNS1 767 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 FAM174BQ3ZCQ3 159 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 CROCCP3Q8IVE0 287 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 LIX1Q8N485 282 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 TMEM125Q96AQ2 219 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 ISG20Q96AZ6 181 aaKnown RBP17.86■□□□□ 0.45
RXRB-202ENST00000374685 ZNF641Q96N77 438 aaPredicted RBP17.86■□□□□ 0.45
RXRB-202ENST00000374685 BTBD9Q96Q07 612 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 P2RY13Q9BPV8 354 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 ACTL8Q9H568 366 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 ATG2BQ96BY7 2078 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 DHRS12A0PJE2 317 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 WASH3PC4AMC7 463 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 CLPTM1O96005 669 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 C8BP07358 591 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 DGKGP49619 791 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 NADK2Q4G0N4 442 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 HMBOX1Q6NT76 420 aa17.86■□□□□ 0.45
RXRB-202ENST00000374685 BORAQ6PGQ7 559 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms