RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TCEAL2Q9H3H9 227 aaPredicted RBP17.1■□□□□ 0.33
PFDN6-201ENST00000374606 MLXIPLQ9NP71 852 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 CPSF2Q9P2I0 782 aaKnown RBP17.1■□□□□ 0.33
PFDN6-201ENST00000374606 APOBEC2Q9Y235 224 aaKnown RBP17.1■□□□□ 0.33
PFDN6-201ENST00000374606 PABPN1LA6NDY0 278 aaKnown RBP17.09■□□□□ 0.33
PFDN6-201ENST00000374606 PRR19A6NJB7 356 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 PDZK1P1A8MUH7 402 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 IFRD1O00458 451 aaPredicted RBP17.09■□□□□ 0.33
PFDN6-201ENST00000374606 KERAO60938 352 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 CSF2P04141 144 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 AK4P27144 223 aaPredicted RBP17.09■□□□□ 0.33
PFDN6-201ENST00000374606 ACTR1BP42025 376 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 ETV4P43268 484 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 ACTR1AP61163 376 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 OR4D1Q15615 310 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 CYHR1Q6ZMK1 362 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 DENND1AQ8TEH3 1009 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 RMDN2Q96LZ7 410 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 PAIP2Q9BPZ3 127 aaKnown RBP17.09■□□□□ 0.33
PFDN6-201ENST00000374606 LRRC61Q9BV99 259 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 WWP1Q9H0M0 922 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 KLF15Q9UIH9 416 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 PSMD13Q9UNM6 376 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 LOC400499M0QZD8 3231 aa17.09■□□□□ 0.33
PFDN6-201ENST00000374606 EIF4E1BA6NMX2 242 aaKnown RBP17.08■□□□□ 0.32
PFDN6-201ENST00000374606 SYCE1LA8MT33 242 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 SUPT3HB4E1H0 165 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 SLC16A5O15375 505 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 SNX2O60749 519 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 SUPT3HO75486 399 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 MATN4O95460 622 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 MYL2P10916 166 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 TAC1P20366 129 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 CYP2A7P20853 494 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 RPL10P27635 214 aaKnown RBP17.08■□□□□ 0.32
PFDN6-201ENST00000374606 ABRQ12979 859 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 PRRT3Q5FWE3 981 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 SLC30A9Q6PML9 568 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 SBSNQ6UWP8 590 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 UNC5DQ6UXZ4 953 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 UBE2R2Q712K3 238 aaPredicted RBP17.08■□□□□ 0.32
PFDN6-201ENST00000374606 CFAP61Q8NHU2 1237 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 CCL4L1Q8NHW4 92 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 GPBAR1Q8TDU6 330 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 ATOH8Q96SQ7 321 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 ZDHHC5Q9C0B5 715 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 INTS9Q9NV88 658 aaKnown RBP17.08■□□□□ 0.32
PFDN6-201ENST00000374606 ADAMTS6Q9UKP5 1117 aa17.08■□□□□ 0.32
PFDN6-201ENST00000374606 POLR3GO15318 223 aaPredicted RBP17.07■□□□□ 0.32
PFDN6-201ENST00000374606 PSIP1O75475 530 aaKnown RBP17.07■□□□□ 0.32
PFDN6-201ENST00000374606 CATP04040 527 aaKnown RBP17.07■□□□□ 0.32
PFDN6-201ENST00000374606 S100BP04271 92 aaPredicted RBP17.07■□□□□ 0.32
PFDN6-201ENST00000374606 ENO2P09104 434 aaPredicted RBP17.07■□□□□ 0.32
PFDN6-201ENST00000374606 DHRS4L1P0CG22 281 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 CPA3P15088 417 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 HALP42357 657 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 CTSKP43235 329 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 SERPINB4P48594 390 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 WDR4P57081 412 aaKnown RBP17.07■□□□□ 0.32
PFDN6-201ENST00000374606 HNRNPKP61978 463 aaKnown RBP eCLIP17.07■□□□□ 0.32
PFDN6-201ENST00000374606 GRIK2Q13002 908 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 ELOCQ15369 112 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 KIF19Q2TAC6 998 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 ZYG11AQ6WRX3 759 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 GLRX5Q86SX6 157 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 TAX1BP1Q86VP1 789 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 GPSM1Q86YR5 675 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
PFDN6-201ENST00000374606 DYDC1Q8WWB3 177 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 ASB11Q8WXH4 323 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 TRIM54Q9BYV2 358 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 ERVMER34-1Q9H9K5 563 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 PRDM8Q9NQV8 689 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 NUDT4Q9NZJ9 180 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 OGFRQ9NZT2 677 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 COPG2Q9UBF2 871 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 SPASTQ9UBP0 616 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 RAXQ9Y2V3 346 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 OARD1Q9Y530 152 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 SNX11Q9Y5W9 270 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 ST14Q9Y5Y6 855 aa17.07■□□□□ 0.32
PFDN6-201ENST00000374606 TARM1B6A8C7 271 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 GFYI3L273 518 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 SMIM24O75264 130 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 RPN2P04844 631 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 CELA2BP08218 269 aaPredicted RBP17.06■□□□□ 0.32
PFDN6-201ENST00000374606 SBK3P0C264 359 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 MAP4P27816 1152 aaKnown RBP17.06■□□□□ 0.32
PFDN6-201ENST00000374606 ACADLP28330 430 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 BDKRB1P46663 353 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 PCLAFQ15004 111 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 PHKG1Q16816 387 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 PPP1R3AQ16821 1122 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 CAPRIN2Q6IMN6 1127 aaKnown RBP17.06■□□□□ 0.32
PFDN6-201ENST00000374606 WASH2PQ6VEQ5 465 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 TAF8Q7Z7C8 310 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 NRROSQ86YC3 692 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 TMEM151AQ8N4L1 468 aa17.06■□□□□ 0.32
PFDN6-201ENST00000374606 ZNF548Q8NEK5 533 aaPredicted RBP17.06■□□□□ 0.32
PFDN6-201ENST00000374606 LMX1AQ8TE12 382 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms