RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 GRB7Q14451 532 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 KRT72Q14CN4 511 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 PRAMEF9Q5VWM5 478 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 METTL21CQ5VZV1 264 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 LARP4Q71RC2 724 aaKnown RBP eCLIP15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 TCAIMQ8N3R3 496 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 FAM160A2Q8N612 972 aaPredicted RBP15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 OR4F6Q8NGB9 312 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 ACTRT2Q8TDY3 377 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 RLN3Q8WXF3 142 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 PYCR2Q96C36 320 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 HIST1H2AHQ96KK5 128 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 UHRF1Q96T88 793 aaPredicted RBP15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 NELL2Q99435 816 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 HIST1H2AJQ99878 128 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 ORAI3Q9BRQ5 295 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 H2AFJQ9BTM1 129 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 ATG10Q9H0Y0 220 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 SLC32A1Q9H598 525 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 STOX2Q9P2F5 926 aaPredicted RBP15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 OPTCQ9UBM4 332 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 SUFUQ9UMX1 484 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 TRIM33Q9UPN9 1127 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 CATP04040 527 aaKnown RBP15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 IMPA1P29218 277 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 KIAA0895LQ68EN5 471 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 TTC23LQ6PF05 361 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 CHSY3Q70JA7 882 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 PDZD3Q86UT5 571 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 KLHDC8AQ8IYD2 350 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 KIRREL3Q8IZU9 778 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 SLC7A6OSQ96CW6 309 aaPredicted RBP15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 C19orf60Q96EN9 201 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 NTMT1Q9BV86 223 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 TPSD1Q9BZJ3 242 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 CHRDQ9H2X0 955 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 CAAP1Q9H8G2 361 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 RMI1Q9H9A7 625 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 THEGQ9P2T0 379 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 WDR37Q9Y2I8 494 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 RRP15Q9Y3B9 282 aaKnown RBP15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 SLCO1B1Q9Y6L6 691 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 EML5Q05BV3 1969 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 IGHV1OR15-9A0A0B4J2B8 117 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 MYO1CO00159 1063 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 CACNB4O00305 520 aaPredicted RBP15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 FPGTO14772 594 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 SLC16A8O95907 504 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 UROSP10746 265 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 ACP5P13686 325 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 MAPK9P45984 424 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 HTR6P50406 440 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 CCR5P51681 352 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 NFATC4Q14934 902 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 XKR7Q5GH72 579 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 CAPRIN2Q6IMN6 1127 aaKnown RBP15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 ASRGL1Q7L266 308 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 CHST15Q7LFX5 561 aaPredicted RBP15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 LRRC70Q7Z2Q7 622 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 LRRC56Q8IYG6 542 aaPredicted RBP15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 UBALD2Q8IYN6 164 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 CDYL2Q8N8U2 506 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 PJA1Q8NG27 643 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 OR1E3Q8WZA6 343 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 BIRC7Q96CA5 298 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 CCDC138Q96M89 665 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 TIMM29Q9BSF4 260 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 INTS7Q9NVH2 962 aaKnown RBP15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 PSMD13Q9UNM6 376 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 SLC22A14Q9Y267 594 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 BTRCQ9Y297 605 aa15.28■□□□□ 0.04
NIPAL3-204ENST00000374399 DNAH14Q0VDD8 3507 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 ATP6AP2A0A1C7CYW4 349 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 KATNA1O75449 491 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 ATP6AP2O75787 350 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 OTCP00480 354 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 CAPN1P07384 714 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 EPB42P16452 691 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 AOC1P19801 751 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 CD6P30203 668 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 PXNP49023 591 aaPredicted RBP15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 CORO7P57737 925 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 ACTN3Q08043 901 aaPredicted RBP15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 AGTRAPQ6RW13 159 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 ACAD11Q709F0 780 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 AFAP1L2Q8N4X5 818 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 CPSF7Q8N684 471 aaKnown RBP15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 LMNTD1Q8N9Z9 388 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 OR2T11Q8NH01 316 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 OR56A3Q8NH54 315 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 ZNF480Q8WV37 535 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 PDXPQ96GD0 296 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 FOPNLQ96NB1 174 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 OR4K3Q96R72 315 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 NRTNQ99748 197 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 GPR174Q9BXC1 333 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 NUSAP1Q9BXS6 441 aaKnown RBP15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 GIMAP2Q9UG22 337 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 MUTYHQ9UIF7 546 aa15.27■□□□□ 0.04
NIPAL3-204ENST00000374399 RNF11Q9Y3C5 154 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms