RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 RRADP55042 308 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 PLEKHS1Q5SXH7 462 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 FAM83HQ6ZRV2 1179 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 NLRP9Q7RTR0 991 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 SERPINA9Q86WD7 417 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 OOSP2Q86WS3 158 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 PPHLN1Q8NEY8 458 aaKnown RBP18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 OR2L2Q8NH16 312 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 TCTN2Q96GX1 697 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 PDLIM2Q96JY6 352 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 VPS37BQ9H9H4 285 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 FANCEQ9HB96 536 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 IMP3Q9NV31 184 aaKnown RBP18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 SOHLH2Q9NX45 425 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 FAM8A1Q9UBU6 413 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 SLC5A6Q9Y289 635 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 TNRC6AQ8NDV7 1962 aaKnown RBP18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 LRBAP50851 2863 aa18.62■□□□□ 0.57
TRAPPC3-204ENST00000373166 AP3B1O00203 1094 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 SLC35G4P0C7Q5 338 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 ADRA1DP25100 572 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 PSMA3P25788 255 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 PRLHRP49683 370 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 CDKN1CP49918 316 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 ITGA1P56199 1179 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 NR6A1Q15406 480 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 TSTD2Q5T7W7 516 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 METRNLQ641Q3 311 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 AFTPHQ6ULP2 937 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 DSELQ8IZU8 1212 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 IQCKQ8N0W5 287 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 NAT14Q8WUY8 206 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 ZFPM2Q8WW38 1151 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 SNRNP40Q96DI7 357 aaKnown RBP18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 CLIP3Q96DZ5 547 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 C19orf60Q96EN9 201 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 MS4A14Q96JA4 679 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 LINC00615Q96LM1 132 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 C5orf34Q96MH7 638 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 SMAD5Q99717 465 aaKnown RBP18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 ACSL5Q9ULC5 683 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 RIMKLBQ9ULI2 386 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 TTC7AQ9ULT0 858 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 TCAF1Q9Y4C2 921 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 DOPEY1Q5JWR5 2465 aa18.61■□□□□ 0.57
TRAPPC3-204ENST00000373166 IGLV3-16A0A075B6K0 115 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 GOLGA6L10A0A0M3HER8 536 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 CBX6O95503 412 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 PRSS56P0CW18 603 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 MTHFD1P11586 935 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 DBN1Q16643 649 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 LCN10Q6JVE6 187 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 TICAM1Q8IUC6 712 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 OR13J1Q8NGT2 312 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 HM13Q8TCT9 377 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 MAGOHBQ96A72 148 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 OSBPL9Q96SU4 736 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 AP1M1Q9BXS5 423 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 WWP1Q9H0M0 922 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 C5AR2Q9P296 337 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 BTRCQ9Y297 605 aa18.6■□□□□ 0.57
TRAPPC3-204ENST00000373166 SHANK1Q9Y566 2161 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 CCDC162PA2VCL2 907 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 OR6C74A6NCV1 312 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 SGTAO43765 313 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 SESN2P58004 480 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 PRAMEP78395 509 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 ITIH4Q14624 930 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 TRIP13Q15645 432 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 PLEKHN1Q494U1 663 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 MICALCLQ6ZW33 695 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 PIANPQ8IYJ0 282 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 ZBTB2Q8N680 514 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 SGSM3Q96HU1 749 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 TTC1Q99614 292 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 SMARCAL1Q9NZC9 954 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 SNX12Q9UMY4 172 aa18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 CFAP20Q9Y6A4 193 aaKnown RBP18.59■□□□□ 0.57
TRAPPC3-204ENST00000373166 OR51F1A6NGY5 319 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 QSOX1O00391 747 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 AP2A2O94973 939 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 GSTM1P09488 218 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 TPSB2P20231 275 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 FOXN2P32314 431 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 RORAP35398 523 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 VPS41P49754 854 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 KPNA2P52292 529 aaKnown RBP18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 CDK16Q00536 496 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 GSTM4Q03013 218 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 ACVR1Q04771 509 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 RAPSNQ13702 412 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 ELOAQ14241 798 aaKnown RBP18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 TPSAB1Q15661 275 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 PCID2Q5JVF3 399 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 VWA5B1Q5TIE3 1220 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 PRAMEF17Q5VTA0 474 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 FAM69BQ5VUD6 431 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 LYPLAL1Q5VWZ2 237 aa18.58■□□□□ 0.56
TRAPPC3-204ENST00000373166 TTC27Q6P3X3 843 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms