RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 GBX1Q14549 363 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 BRD3Q15059 726 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 TYSND1Q2T9J0 566 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 FASTKD1Q53R41 847 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 PLEKHS1Q5SXH7 462 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 ARMC3Q5W041 872 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 LCN10Q6JVE6 187 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 FAM199XQ6PEV8 388 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 CDHR3Q6ZTQ4 885 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 CAND1Q86VP6 1230 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 LINC01555Q8NAE3 123 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 MFSD3Q96ES6 412 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 FAM117AQ9C073 453 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 FAM60AQ9NP50 221 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 POLG2Q9UHN1 485 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 KCND3Q9UK17 655 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 SOX13Q9UN79 622 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 UBR5O95071 2799 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 GSAPA4D1B5 854 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 J3QKU1 62 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 AP3B1O00203 1094 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 CD3EAPO15446 510 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 CHRM5P08912 532 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 MGAT1P26572 445 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 PKLRP30613 574 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 MAGEA3P43357 314 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 CCR10P46092 362 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 TTPAP49638 278 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 NFKB2Q00653 900 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 KYNUQ16719 465 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 DNAJC21Q5F1R6 531 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 AARS2Q5JTZ9 985 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 CTSL3PQ5NE16 218 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 TMTC4Q5T4D3 741 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 ANKRD22Q5VYY1 191 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 ZNF449Q6P9G9 518 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 TMEM135Q86UB9 458 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 DSELQ8IZU8 1212 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 CPT1BQ92523 772 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 BIRC8Q96P09 236 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 KCNF1Q9H3M0 494 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 ACTL8Q9H568 366 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 PCMTD2Q9NV79 361 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 SOHLH2Q9NX45 425 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 OR6C2Q9NZP2 312 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 JRKLQ9Y4A0 524 aa17.39■□□□□ 0.37
TRAPPC3-202ENST00000373162 PIPSLA2A3N6 862 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 GCGRP47871 477 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 ARL4DP49703 201 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 DEFB109BQ30KR1 87 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 IZUMO3Q5VZ72 239 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 KIAA0930Q6ICG6 404 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 FAM198BQ6UWH4 519 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 TRIM73Q86UV7 250 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 KRT222Q8N1A0 295 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 AGGF1Q8N302 714 aaeCLIP17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 C19orf47Q8N9M1 422 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 ADAMTS17Q8TE56 1095 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 APOBEC4Q8WW27 367 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 LPGAT1Q92604 370 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 MS4A14Q96JA4 679 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 TTC1Q99614 292 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 GPR87Q9BY21 358 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 ENAMQ9NRM1 1142 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 BFARQ9NZS9 450 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 SEC16AO15027 2179 aa17.38■□□□□ 0.37
TRAPPC3-202ENST00000373162 PRICKLE3O43900 615 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 CCNYL3P0C7X3 344 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 PTPN4P29074 926 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 ADARP55265 1226 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 IL10RAQ13651 578 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 UGT8Q16880 541 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 SLC5A12Q1EHB4 618 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 SYTL3Q4VX76 610 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 C16orf46Q6P387 395 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 UNC5DQ6UXZ4 953 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 GSTA5Q7RTV2 222 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 LRRC6Q86X45 466 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 TMEM126BQ8IUX1 230 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 APLFQ8IW19 511 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 COG1Q8WTW3 980 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 ASZ1Q8WWH4 475 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 PBKQ96KB5 322 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 TRIM56Q9BRZ2 755 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 KLHL25Q9H0H3 589 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 CHST8Q9H2A9 424 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 PLAGL1Q9UM63 463 aa17.37■□□□□ 0.37
TRAPPC3-202ENST00000373162 TMEM150CB9EJG8 249 aa17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 MEN1O00255 615 aa17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 SLC28A2O43868 658 aa17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 AVILO75366 819 aa17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 KRT14P02533 472 aa17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 CTSBP07858 339 aa17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 RAB40ALP0C0E4 278 aa17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 MLNP12872 115 aa17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 PPARGP37231 505 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 COILP38432 576 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 RAB28P51157 221 aa17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 RPS18P62269 152 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-202ENST00000373162 HSPA14Q0VDF9 509 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms