RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 SGO1Q5FBB7 561 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 TCEAL5Q5H9L2 206 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 RABL3Q5HYI8 236 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 FAM78AQ5JUQ0 283 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 OR52E8Q6IFG1 317 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 ERAP2Q6P179 960 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 ARPINQ7Z6K5 226 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 C12orf40Q86WS4 652 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 GALNT13Q8IUC8 556 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 SPPL2CQ8IUH8 684 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 HID1Q8IV36 788 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 NPAS3Q8IXF0 933 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 KIAA2013Q8IYS2 634 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 RGL4Q8IZJ4 473 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 ZNF366Q8N895 744 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 CANT1Q8WVQ1 401 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 BTN2A2Q8WVV5 523 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 EME1Q96AY2 570 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 ABHD8Q96I13 439 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 GDF15Q99988 308 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 LRTM1Q9HBL6 345 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 CCM2LQ9NUG4 571 aaPredicted RBP13.09□□□□□ -0.31
CSTF2-201ENST00000372972 PDP2Q9P2J9 529 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 ZNHIT2Q9UHR6 403 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
CSTF2-201ENST00000372972 CCDC85CA6NKD9 419 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 ZNF839A8K0R7 811 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 TULP3O75386 442 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 SEC22BO75396 215 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 SLCO2B1O94956 709 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 ZCCHC18P0CG32 403 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 PIM1P11309 404 aaPredicted RBP13.08□□□□□ -0.32
CSTF2-201ENST00000372972 EPORP19235 508 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 VARSP26640 1264 aaKnown RBP13.08□□□□□ -0.32
CSTF2-201ENST00000372972 MMP12P39900 470 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 SLC6A12P48065 614 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 GSK3BP49841 420 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 HMGCS1Q01581 520 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 INPP5AQ14642 412 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 PDK3Q15120 406 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 ZXDCQ2QGD7 858 aaPredicted RBP13.08□□□□□ -0.32
CSTF2-201ENST00000372972 POM121L1PQ3SYA9 428 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 CACHD1Q5VU97 1274 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 SLC2A7Q6PXP3 512 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 LIPIQ6XZB0 460 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
CSTF2-201ENST00000372972 PIP4K2CQ8TBX8 421 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 VPS35Q96QK1 796 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 ZBTB18Q99592 522 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 CDCA3Q99618 268 aaPredicted RBP13.08□□□□□ -0.32
CSTF2-201ENST00000372972 P2RY13Q9BPV8 354 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 KCTD14Q9BQ13 255 aaPredicted RBP13.08□□□□□ -0.32
CSTF2-201ENST00000372972 TRIM8Q9BZR9 551 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 SEMA6AQ9H2E6 1030 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 DZANK1Q9NVP4 752 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 ASIC5Q9NY37 505 aa13.08□□□□□ -0.32
CSTF2-201ENST00000372972 OR2AG2A6NM03 316 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 H0YJX3 145 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 ARPC2O15144 300 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 RSL1D1O76021 490 aaKnown RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 ELFN1P0C7U0 828 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 ZNF26P17031 533 aaPredicted RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 ACOX1Q15067 660 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 CPSF6Q16630 551 aaKnown RBP eCLIP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 PTCHD3Q3KNS1 767 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 GGTA1PQ4G0N0 100 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 FBXL19Q6PCT2 694 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 DLEU7Q6UYE1 221 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 IFNEQ86WN2 208 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 NRSN1Q8IZ57 195 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 GALNT4Q8N4A0 578 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 BEND7Q8N7W2 519 aaPredicted RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 ST13P5Q8NFI4 369 aaPredicted RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 FGF13Q92913 245 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 GLYATL1Q969I3 302 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 PPWD1Q96BP3 646 aaKnown RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 MTFMTQ96DP5 389 aaKnown RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 MRPL38Q96DV4 380 aaKnown RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 ASB16Q96NS5 453 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 FAM83CQ9BQN1 747 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 INTS7Q9NVH2 962 aaKnown RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 C1orf109Q9NX04 203 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 CNOT6Q9ULM6 557 aaKnown RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 SNX6Q9UNH7 406 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 DHRS12A0PJE2 317 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 KPNA3O00505 521 aaPredicted RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 WNT9AO14904 365 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 LINC01565O15544 149 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 HNRNPRO43390 633 aaKnown RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 PRNPP04156 253 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 LINGO3P0C6S8 592 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 IL10P22301 178 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 DGKQP52824 942 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 PWP1Q13610 501 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 KIAA0040Q15053 153 aa13.07□□□□□ -0.32
CSTF2-201ENST00000372972 AASDHQ4L235 1098 aaPredicted RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 ZNF648Q5T619 568 aaPredicted RBP13.07□□□□□ -0.32
CSTF2-201ENST00000372972 PARS2Q7L3T8 475 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms