RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MBOAT1Q6ZNC8 495 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 ANKRD46Q86W74 232 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 OXR1Q8N573 874 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 DHRS1Q96LJ7 313 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 C12orf66Q96MD2 445 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 FBXO9Q9UK97 447 aaPredicted RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 FABP12A6NFH5 140 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 ELOA3DA6NLF2 546 aaPredicted RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 ZNF99A8MXY4 864 aaPredicted RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 SRPRAP08240 638 aaKnown RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 FOXM1Q08050 763 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 TARDBPQ13148 414 aaKnown RBP eCLIP11.34□□□□□ -0.592e-9■■■■■ 35.2
VCL-202ENST00000372755 GFOD2Q3B7J2 385 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 ELOA3BQ3SY89 546 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 THOC7Q6I9Y2 204 aaKnown RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 IQCKQ8N0W5 287 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 SDR16C5Q8N3Y7 309 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 KLHL36Q8N4N3 616 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 ELOA3Q8NG57 546 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 C1orf216Q8TAB5 229 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 AIFM2Q9BRQ8 373 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 ITGA10O75578 1167 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 AGR2O95994 175 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 UGT1A3P35503 534 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 PGDP52209 483 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 ABHD13Q7L211 337 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 ZNF781Q8N8C0 355 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 C1orf127Q8N9H9 656 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 CCDC107Q8WV48 283 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 NKD1Q969G9 470 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 ST6GALNAC4Q9H4F1 302 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 CXorf21Q9HAI6 301 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 KLF15Q9UIH9 416 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 FBXW11Q9UKB1 542 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 DUSP11O75319 330 aaKnown RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 ANXA8P13928 327 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 POU2F1P14859 743 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 AZGP1P25311 298 aaKnown RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 NDUFS1P28331 727 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 MPIP34949 423 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 NCBP2P52298 156 aaKnown RBP eCLIP11.34□□□□□ -0.592e-6■□□□□ 9.8
VCL-202ENST00000372755 HSDL1Q3SXM5 330 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 HID1Q8IV36 788 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 ZNF527Q8NB42 609 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 PCED1BQ96HM7 432 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 TFB2MQ9H5Q4 396 aaKnown RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 MOV10Q9HCE1 1003 aaKnown RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 MED11Q9P086 117 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 NDRG2Q9UN36 371 aaKnown RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 PXDNQ92626 1479 aa11.33□□□□□ -0.59
VCL-202ENST00000372755 PLSCR1O15162 318 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 CYP17A1P05093 508 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 HMGN1P05114 100 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 IQCCQ4KMZ1 466 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 KIAA0930Q6ICG6 404 aaPredicted RBP11.33□□□□□ -0.6
VCL-202ENST00000372755 KCTD8Q6ZWB6 473 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 SATL1Q86VE3 508 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 PNLDC1Q8NA58 520 aaKnown RBP11.33□□□□□ -0.6
VCL-202ENST00000372755 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 TESCQ96BS2 214 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 FAXDC2Q96IV6 333 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 SEZ6LQ9BYH1 1024 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 ACSS2Q9NR19 701 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 POLR3BQ9NW08 1133 aaPredicted RBP11.33□□□□□ -0.6
VCL-202ENST00000372755 IGSF9Q9P2J2 1179 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 TREHO43280 583 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 GRIK5Q16478 980 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 ARL14EPQ8N8R7 260 aaPredicted RBP11.33□□□□□ -0.6
VCL-202ENST00000372755 TRPM4Q8TD43 1214 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 RFT1Q96AA3 541 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 SCGB3A2Q96PL1 93 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 COPS4Q9BT78 406 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 ANKHQ9HCJ1 492 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 CDC14AQ9UNH5 594 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 ARL5CA6NH57 179 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 NCK1P16333 377 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 RBM34P42696 430 aaKnown RBP11.33□□□□□ -0.6
VCL-202ENST00000372755 GRPEL2Q8TAA5 225 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 REXO2Q9Y3B8 237 aaKnown RBP11.33□□□□□ -0.6
VCL-202ENST00000372755 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 DEPDC5O75140 1603 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 ILVBLA1L0T0 632 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 ZNF726A6NNF4 738 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 KAT7O95251 611 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 EOMESO95936 686 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 SLC6A4P31645 630 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 PLA2G16P53816 162 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 SP140Q13342 867 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 SCARB2Q14108 478 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 DCBLD1Q8N8Z6 715 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 RAB2BQ8WUD1 216 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 NXPE2Q96DL1 559 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 FEM1AQ9BSK4 669 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 L7N2F9 121 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 PLOD2O00469 737 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 TPST2O60704 377 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 MAP3K8P41279 467 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 CCR8P51685 355 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 VAMP2P63027 116 aa11.33□□□□□ -0.6
VCL-202ENST00000372755 FAM174BQ3ZCQ3 159 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms