RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 GPR42O15529 346 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 RNASEH1O60930 286 aaKnown RBP24.39■■□□□ 1.49
CTSA-203ENST00000372459 SLC22A3O75751 556 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 CAPN3P20807 821 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 PREPP48147 710 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 KCNK10P57789 538 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 GTF2H3Q13889 308 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 ZXDCQ2QGD7 858 aaPredicted RBP24.39■■□□□ 1.49
CTSA-203ENST00000372459 COQ5Q5HYK3 327 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 EP400NLQ6ZTU2 488 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 MTSS1LQ765P7 747 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 TRIM74Q86UV6 250 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 ZNF513Q8N8E2 541 aaPredicted RBP24.39■■□□□ 1.49
CTSA-203ENST00000372459 OR2AG1Q9H205 316 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 TRIM39Q9HCM9 518 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 HEBP1Q9NRV9 189 aa24.39■■□□□ 1.49
CTSA-203ENST00000372459 E7ENX8 843 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 MAP3K7O43318 606 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 EPORP19235 508 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 PBLDP30039 288 aaPredicted RBP24.38■■□□□ 1.49
CTSA-203ENST00000372459 WASP42768 502 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 AP5B1Q2VPB7 878 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 C8orf82Q6P1X6 216 aaPredicted RBP24.38■■□□□ 1.49
CTSA-203ENST00000372459 SLC22A15Q8IZD6 547 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 HIPK4Q8NE63 616 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 ZNF514Q96K75 400 aaPredicted RBP24.38■■□□□ 1.49
CTSA-203ENST00000372459 FOPNLQ96NB1 174 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 RSPH9Q9H1X1 276 aaPredicted RBP24.38■■□□□ 1.49
CTSA-203ENST00000372459 CCL27Q9Y4X3 112 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 ARHGEF33A8MVX0 844 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 MANBAO00462 879 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 CATP04040 527 aaKnown RBP24.38■■□□□ 1.49
CTSA-203ENST00000372459 XRCC1P18887 633 aaPredicted RBP24.38■■□□□ 1.49
CTSA-203ENST00000372459 DRD3P35462 400 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 SOX9P48436 509 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 GALK1P51570 392 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 GGTA1PQ4G0N0 100 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 LAYNQ6UX15 382 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 TRIM46Q7Z4K8 759 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 RETREG3Q86VR2 466 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 TRAPPC5Q8IUR0 188 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 LILRA3Q8N6C8 439 aaPredicted RBP24.38■■□□□ 1.49
CTSA-203ENST00000372459 RNF148Q8N7C7 305 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 PYDC1Q8WXC3 89 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 SPDL1Q96EA4 605 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 DNAJC11Q9NVH1 559 aa24.38■■□□□ 1.49
CTSA-203ENST00000372459 ZNF490Q9ULM2 529 aaPredicted RBP24.38■■□□□ 1.49
CTSA-203ENST00000372459 LILRB5O75023 590 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 KRT6AP02538 564 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 KRT6BP04259 564 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 PAX7P23759 505 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 TNFRSF4P43489 277 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 KRT6CP48668 564 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 UFM1P61960 85 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 CAMK2GQ13555 558 aaPredicted RBP24.37■■□□□ 1.49
CTSA-203ENST00000372459 RCAN2Q14206 197 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 FLOT2Q14254 428 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 CST6Q15828 149 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 SMU1Q2TAY7 513 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 ATL1Q8WXF7 558 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 USP7Q93009 1102 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 PYCR2Q96C36 320 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 CLDND1Q9NY35 253 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 MAP10Q9P2G4 905 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 REV3LO60673 3130 aa24.37■■□□□ 1.49
CTSA-203ENST00000372459 C9JVG2 144 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 MID1O15344 667 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 MAD2L1Q13257 205 aaPredicted RBP24.36■■□□□ 1.49
CTSA-203ENST00000372459 ZNF658BQ4V348 819 aaPredicted RBP24.36■■□□□ 1.49
CTSA-203ENST00000372459 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.36■■□□□ 1.49
CTSA-203ENST00000372459 KBTBD6Q86V97 674 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 CSGALNACT1Q8TDX6 532 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 TEX37Q96LM6 180 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 CCDC138Q96M89 665 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 HOPXQ9BPY8 73 aaPredicted RBP24.36■■□□□ 1.49
CTSA-203ENST00000372459 SLC52A3Q9NQ40 469 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 GID8Q9NWU2 228 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 ATXN10Q9UBB4 475 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 SLC22A14Q9Y267 594 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 A0A1W2PP18 115 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 H3BM21 787 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 AP1G1O43747 822 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 VEGFDO43915 354 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 BAG2O95816 211 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 ADH1BP00325 375 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 CPSF6Q16630 551 aaKnown RBP eCLIP24.36■■□□□ 1.49
CTSA-203ENST00000372459 IMPG1Q17R60 797 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 NEK5Q6P3R8 708 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 AADATQ8N5Z0 425 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 MAGEB10Q96LZ2 347 aaPredicted RBP24.36■■□□□ 1.49
CTSA-203ENST00000372459 ZNF184Q99676 751 aaPredicted RBP24.36■■□□□ 1.49
CTSA-203ENST00000372459 ATG10Q9H0Y0 220 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 FARSBQ9NSD9 589 aaKnown RBP24.36■■□□□ 1.49
CTSA-203ENST00000372459 TMEM181Q9P2C4 612 aa24.36■■□□□ 1.49
CTSA-203ENST00000372459 FAM234BA2RU67 622 aa24.35■■□□□ 1.49
CTSA-203ENST00000372459 CCR3P51677 355 aa24.35■■□□□ 1.49
CTSA-203ENST00000372459 POLR2JP52435 117 aaKnown RBP24.35■■□□□ 1.49
CTSA-203ENST00000372459 RFTN2Q52LD8 501 aaPredicted RBP24.35■■□□□ 1.49
CTSA-203ENST00000372459 AGBL4Q5VU57 503 aa24.35■■□□□ 1.49
CTSA-203ENST00000372459 IL23RQ5VWK5 629 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms