RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TAF1AQ15573 450 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 LDLRAP1Q5SW96 308 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 EMID1Q96A84 441 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 ACDQ96AP0 544 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 IRS2Q9Y4H2 1338 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 NR2F6P10588 404 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 TCF4P15884 667 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SSR2P43308 183 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 BIKQ13323 160 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 TMPRSS11BQ86T26 416 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SERINC5Q86VE9 423 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SERPINA9Q86WD7 417 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 RAB43Q86YS6 212 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 LPGAT1Q92604 370 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 IGSF21Q96ID5 467 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SLC38A3Q99624 504 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SDCBP2Q9H190 292 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SP140LQ9H930 580 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 CHURC1-FNTBB4DL54 471 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 PDLIM1O00151 329 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 OR10H3O60404 316 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 RAB5BP61020 215 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 BATFQ16520 125 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 TRIM40Q6P9F5 258 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 TEFMQ96QE5 360 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 TUBGCP5Q96RT8 1024 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SNX7Q9UNH6 387 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 HEBP2Q9Y5Z4 205 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 IQCF3P0C7M6 154 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 MAGEA12P43365 314 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 DHPSP49366 369 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 ATXN1P54253 815 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 ESRP1Q6NXG1 681 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 C17orf99Q6UX52 265 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZNF461Q8TAF7 563 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 PIH1D2Q8WWB5 315 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 KLK6Q92876 244 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 NKD2Q969F2 451 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SCN11AQ9UI33 1791 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 GTPBP1O00178 669 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 BCKDKO14874 412 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 OIP5O43482 229 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 FAM155BO75949 473 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 C2P06681 752 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 NR2F1P10589 423 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 ARHGDIBP52566 201 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 RPS24P62847 133 aaKnown RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 TIGD2Q4W5G0 525 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 HSD17B12Q53GQ0 312 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SYPL2Q5VXT5 272 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 REP15Q6BDI9 236 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 GLYATQ6IB77 296 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 CHST15Q7LFX5 561 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 LCN9Q8WX39 176 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 CPT1BQ92523 772 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SLC9A6Q92581 669 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 NUS1Q96E22 293 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 SLC9A8Q9Y2E8 581 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 CFIP05156 583 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZNF865P0CJ78 1059 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 THRBP10828 461 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 RPL35P42766 123 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 MAZP56270 477 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 SYT16Q17RD7 645 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 XKR4Q5GH76 650 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 PDE12Q6L8Q7 609 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 TMEM220Q6QAJ8 160 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 SATL1Q86VE3 508 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 NTAN1Q96AB6 310 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 FNDC11Q9BVV2 318 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 ELOVL2Q9NXB9 296 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 ENSAO43768 121 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 ERN1O75460 977 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 ALAS2P22557 587 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 PIK3CBP42338 1070 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 PTGIRP43119 386 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 SLC35G1Q2M3R5 365 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 HES5Q5TA89 166 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 BRSK1Q8TDC3 778 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 GPR21Q99679 349 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 GMEB2Q9UKD1 530 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 DHFRP00374 187 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 GOT2P00505 430 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 PRKCAP17252 672 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 PEX2P28328 305 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 RPS9P46781 194 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 AAK1Q2M2I8 961 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 RNASEH2BQ5TBB1 312 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 PPCDCQ96CD2 204 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 LMLNQ96KR4 655 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 SIX2Q9NPC8 291 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 DGKBQ9Y6T7 804 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZSCAN5BA6NJL1 495 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 IPO13O94829 963 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms