RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CYGBQ8WWM9 190 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 ZNF583Q96ND8 569 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 BDH2Q9BUT1 245 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 SLC12A9Q9BXP2 914 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 HCFC1R1Q9NWW0 138 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 PTTG2Q9NZH5 202 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 NIPSNAP3AQ9UFN0 247 aaPredicted RBP28.29■■■□□ 2.12
SSBP3-204ENST00000371320 CD84Q9UIB8 345 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 ACRP10323 421 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 EPORP19235 508 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 GGT1P19440 569 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 DYNC1I2Q13409 638 aaKnown RBP28.28■■■□□ 2.12
SSBP3-204ENST00000371320 SPANXN4Q5MJ08 99 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 BORAQ6PGQ7 559 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 AADATQ8N5Z0 425 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 KRTCAP2Q8N6L1 136 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 ITFG1Q8TB96 612 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 BPIFB1Q8TDL5 484 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 CLMPQ9H6B4 373 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 TMPRSS11EQ9UL52 423 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 TULP3O75386 442 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 PGRP06401 933 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 C8GP07360 202 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 PABPC1P11940 636 aaKnown RBP28.28■■■□□ 2.12
SSBP3-204ENST00000371320 NFKBIAP25963 317 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 POLR2LP62875 67 aaKnown RBP28.28■■■□□ 2.12
SSBP3-204ENST00000371320 SUSD1Q6UWL2 747 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 B3GNT6Q6ZMB0 384 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 RIMKLAQ8IXN7 391 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 TCAIMQ8N3R3 496 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 SH3GL3Q99963 347 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 THUMPD3Q9BV44 507 aaKnown RBP28.28■■■□□ 2.12
SSBP3-204ENST00000371320 BBS2Q9BXC9 721 aa28.28■■■□□ 2.12
SSBP3-204ENST00000371320 MBD1Q9UIS9 605 aaPredicted RBP28.28■■■□□ 2.12
SSBP3-204ENST00000371320 ARHGEF15O94989 841 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 HIST1H2AGP0C0S8 130 aaPredicted RBP28.27■■■□□ 2.12
SSBP3-204ENST00000371320 HIST1H2ADP20671 130 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 MAP7Q14244 749 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 TTC33Q6PID6 262 aaPredicted RBP28.27■■■□□ 2.12
SSBP3-204ENST00000371320 GDPD4Q6W3E5 623 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 LRRC70Q7Z2Q7 622 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 OR2T12Q8NG77 320 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 HIST1H2AHQ96KK5 128 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 HIST1H2AJQ99878 128 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 H2AFJQ9BTM1 129 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 ACPTQ9BZG2 426 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 SMPD3Q9NY59 655 aaPredicted RBP28.27■■■□□ 2.12
SSBP3-204ENST00000371320 PCDH10Q9P2E7 1040 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 A0A1W2PQ67 120 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 PABPN1LA6NDY0 278 aaKnown RBP28.27■■■□□ 2.12
SSBP3-204ENST00000371320 NUAK1O60285 661 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 PDYNP01213 254 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 ATP1B2P14415 290 aaPredicted RBP28.27■■■□□ 2.12
SSBP3-204ENST00000371320 RPS9P46781 194 aaKnown RBP28.27■■■□□ 2.12
SSBP3-204ENST00000371320 TUBA4AP68366 448 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 USP39Q53GS9 565 aaKnown RBP28.27■■■□□ 2.12
SSBP3-204ENST00000371320 MAGEE2Q8TD90 523 aaPredicted RBP28.27■■■□□ 2.12
SSBP3-204ENST00000371320 ASB11Q8WXH4 323 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 CRISPLD2Q9H0B8 497 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 CD320Q9NPF0 282 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 PKD2L2Q9NZM6 624 aa28.27■■■□□ 2.12
SSBP3-204ENST00000371320 GSTA4O15217 222 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 CLOCKO15516 846 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 BCKDHAP12694 445 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 CYP4F3Q08477 520 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 GBX1Q14549 363 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 FAM98BQ52LJ0 330 aaKnown RBP28.26■■■□□ 2.11
SSBP3-204ENST00000371320 ZNF786Q8N393 782 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 TNIP2Q8NFZ5 429 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 CLHC1Q8NHS4 586 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 SELENOMQ8WWX9 145 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 CCDC115Q96NT0 180 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 THEGQ9P2T0 379 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 ZNF639Q9UID6 485 aa28.26■■■□□ 2.11
SSBP3-204ENST00000371320 TIMP1P01033 207 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 BOP1Q14137 746 aaKnown RBP28.25■■■□□ 2.11
SSBP3-204ENST00000371320 KCTD21Q4G0X4 260 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 PYCR3Q53H96 274 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 DHRSXQ8N5I4 330 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 KLHL23Q8NBE8 558 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 OR10A6Q8NH74 314 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 FIG4Q92562 907 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 TCEAL4Q96EI5 215 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 MPP4Q96JB8 637 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 OR52E6Q96RD3 313 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 RAP2AP10114 183 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 ZXDCQ2QGD7 858 aaPredicted RBP28.25■■■□□ 2.11
SSBP3-204ENST00000371320 VRK3Q8IV63 474 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 SH3GL1Q99961 368 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 BEGAINQ9BUH8 593 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 ELOVL6Q9H5J4 265 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 SNX6Q9UNH7 406 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 FADS3Q9Y5Q0 445 aa28.25■■■□□ 2.11
SSBP3-204ENST00000371320 H3BSA7 217 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 MPC1LP0DKB6 136 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 RECQLP46063 649 aaPredicted RBP28.24■■■□□ 2.11
SSBP3-204ENST00000371320 ALDH3B2P48448 385 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 HNMTP50135 292 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 CDH15P55291 814 aa28.24■■■□□ 2.11
SSBP3-204ENST00000371320 DNAJC14Q6Y2X3 702 aaPredicted RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms