RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TTC30BQ8N4P2 665 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 PNPLA1Q8N8W4 532 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 GLB1L3Q8NCI6 653 aaPredicted RBP3.53□□□□□ -1.85
MCF2-202ENST00000370573 PDCD6IPQ8WUM4 868 aaKnown RBP3.53□□□□□ -1.85
MCF2-202ENST00000370573 NELL1Q92832 810 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 DNASE1L2Q92874 299 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 HDAC10Q969S8 669 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 ZBTB8AQ96BR9 441 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 RMDN1Q96DB5 314 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 ECHDC3Q96DC8 303 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 TSPAN17Q96FV3 270 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 TTC25Q96NG3 672 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 KLHL32Q96NJ5 620 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 RANBP9Q96S59 729 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 TMEM109Q9BVC6 243 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 UNKQ9C0B0 810 aaKnown RBP3.53□□□□□ -1.85
MCF2-202ENST00000370573 IL22Q9GZX6 179 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 ZDHHC6Q9H6R6 413 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 C8orf33Q9H7E9 229 aaPredicted RBP3.53□□□□□ -1.85
MCF2-202ENST00000370573 ATP13A3Q9H7F0 1226 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 UGT1A7Q9HAW7 530 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 UGT1A10Q9HAW8 530 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 UGT1A8Q9HAW9 530 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 PRSS16Q9NQE7 514 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 SLC2A4RGQ9NR83 387 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 TREX1Q9NSU2 369 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 POLR3BQ9NW08 1133 aaPredicted RBP3.53□□□□□ -1.85
MCF2-202ENST00000370573 MOCS1Q9NZB8 636 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 IL1RAPL1Q9NZN1 696 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 SLC17A6Q9P2U8 582 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 SARDHQ9UL12 918 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 TCAF1Q9Y4C2 921 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 ARL5AQ9Y689 179 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 STON1Q9Y6Q2 735 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 FAM169AQ9Y6X4 670 aa3.53□□□□□ -1.85
MCF2-202ENST00000370573 A0A087WUV0 522 aaPredicted RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 A0A0J9YYE9 177 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 EDDM13A0A1B0GTR0 161 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 MAGEB16A2A368 324 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 FAM159BA6NKW6 160 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 A8MX80 341 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 FOXO6A8MYZ6 492 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 H3BQF6 201 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 H3BUI4 141 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 AP3B1O00203 1094 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 PLK4O00444 970 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 CCL22O00626 93 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 PHGDHO43175 533 aaKnown RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 SOCS5O75159 536 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 SKAP2O75563 359 aaPredicted RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 FAM155BO75949 473 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 TRBC1P01850 177 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 F7P08709 466 aaPredicted RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 GSTA2P09210 222 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 ERVK-10P10266 1014 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 BRAFP15056 766 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 PSMA3P25788 255 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 SERPINA4P29622 427 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 SLC7A1P30825 629 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 MC4RP32245 332 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 HNF1BP35680 557 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 SLCO1A2P46721 670 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 SUMO3P55854 103 aaPredicted RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 RPL26P61254 145 aaKnown RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 SPIDRQ14159 915 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 FRG1Q14331 258 aaKnown RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 POM121L1PQ3SYA9 428 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 LRRC73Q5JTD7 316 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 SPANXN3Q5MJ09 141 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 CEP85LQ5SZL2 805 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 TSTD2Q5T7W7 516 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 SERPINA13PQ6UXR4 307 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 CYS1Q717R9 158 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 CPOQ8IVL8 374 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 IL17RCQ8NAC3 791 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 OR13C4Q8NGS5 318 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 OR13J1Q8NGT2 312 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 OR14C36Q8NHC7 312 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 GSDMBQ8TAX9 411 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 BRSK1Q8TDC3 778 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 BLOC1S5Q8TDH9 187 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 UCMAQ8WVF2 138 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 ARRDC3Q96B67 414 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 ZNF641Q96N77 438 aaPredicted RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 SH3GL2Q99962 352 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 VRK1Q99986 396 aaPredicted RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 SPATA25Q9BR10 227 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 ADGRE3Q9BY15 652 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 MRM3Q9HC36 420 aaKnown RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 CD248Q9HCU0 757 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 HAUS2Q9NVX0 235 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 UCKL1Q9NWZ5 548 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 EURLQ9NYK6 297 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 IL36AQ9UHA7 158 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 RPL26L1Q9UNX3 145 aaKnown RBP3.52□□□□□ -1.85
MCF2-202ENST00000370573 PPIL1Q9Y3C6 166 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 TSPAN11A1L157 253 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 HEATR9A2RTY3 570 aa3.52□□□□□ -1.85
MCF2-202ENST00000370573 NPIPB15A6NHN6 443 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms