RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 CCDC187A0A096LP49 1063 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 PRAMEF33A0A0G2JMD5 474 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 EXOC1LA0A1B0GW35 172 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 GSAPA4D1B5 854 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 FAM149AA5PLN7 773 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 C2orf74A8MZ97 194 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 CAPN5O15484 640 aaPredicted RBP13.37□□□□□ -0.27
SSR4-202ENST00000370085 PSIP1O75475 530 aaKnown RBP13.37□□□□□ -0.27
SSR4-202ENST00000370085 C1orf105O95561 183 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 HIST1H2AGP0C0S8 130 aaPredicted RBP13.37□□□□□ -0.27
SSR4-202ENST00000370085 HIST1H2ADP20671 130 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 CNTFP26441 200 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 MSH2P43246 934 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 SERPINB9P50453 376 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 ZFP36L1Q07352 338 aaKnown RBP13.37□□□□□ -0.27
SSR4-202ENST00000370085 SP140Q13342 867 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 WDR93Q6P2C0 686 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 PAQR3Q6TCH7 311 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 LSMEM2Q8N112 164 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 CARFQ8N187 725 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 AGBL5Q8NDL9 886 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 GIMAP7Q8NHV1 300 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 WDR36Q8NI36 951 aaKnown RBP13.37□□□□□ -0.27
SSR4-202ENST00000370085 MCOLN3Q8TDD5 553 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 EEF1AKMT1Q8WVE0 214 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 RSC1A1Q92681 617 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 NXPE2Q96DL1 559 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 LINGO1Q96FE5 620 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 HIST1H2AHQ96KK5 128 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 TGM7Q96PF1 710 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 GPR22Q99680 433 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 HIST1H2AJQ99878 128 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 H2AFJQ9BTM1 129 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 NRSN2Q9GZP1 204 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 GPAMQ9HCL2 828 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 GALPQ9UBC7 116 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 KLK13Q9UKR3 277 aa13.37□□□□□ -0.27
SSR4-202ENST00000370085 MN1Q10571 1320 aaPredicted RBP13.37□□□□□ -0.27
SSR4-202ENST00000370085 IGHV5-10-1A0A0J9YXX1 117 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 MED19A0JLT2 244 aaPredicted RBP13.36□□□□□ -0.27
SSR4-202ENST00000370085 PIPSLA2A3N6 862 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 SLC16A5O15375 505 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 RIPK2O43353 540 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 PIAS1O75925 651 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 KRT38O76015 456 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 C9P02748 559 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 ITGA2BP08514 1039 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 FAM153BP0C7A2 387 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 JMJD7P0C870 316 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 THRAP10827 490 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 CRABP2P29373 138 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 CSF2RBP32927 897 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 ARL4DP49703 201 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 FAM153CQ494X1 144 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 SNAP47Q5SQN1 464 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 EMBQ6PCB8 327 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 RAPH1Q70E73 1250 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 UBE2R2Q712K3 238 aaPredicted RBP13.36□□□□□ -0.27
SSR4-202ENST00000370085 RAB11FIP2Q7L804 512 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 SLITRK4Q8IW52 837 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 FBXO15Q8NCQ5 510 aaPredicted RBP13.36□□□□□ -0.27
SSR4-202ENST00000370085 UBLCP1Q8WVY7 318 aaPredicted RBP13.36□□□□□ -0.27
SSR4-202ENST00000370085 JPH3Q8WXH2 748 aaPredicted RBP13.36□□□□□ -0.27
SSR4-202ENST00000370085 ASB11Q8WXH4 323 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 ANKRD7Q92527 254 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 MRRFQ96E11 262 aaKnown RBP13.36□□□□□ -0.27
SSR4-202ENST00000370085 PDLIM5Q96HC4 596 aaKnown RBP13.36□□□□□ -0.27
SSR4-202ENST00000370085 CCDC74BQ96LY2 380 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 SLC30A3Q99726 388 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 SEMA6CQ9H3T2 930 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 OGFRQ9NZT2 677 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 SPATA7Q9P0W8 599 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 PDP2Q9P2J9 529 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 KLHL3Q9UH77 587 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 MTO1Q9Y2Z2 717 aaKnown RBP13.36□□□□□ -0.27
SSR4-202ENST00000370085 NFS1Q9Y697 457 aa13.36□□□□□ -0.27
SSR4-202ENST00000370085 TLCD2A6NGC4 264 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 POC1B-GALNT4F8VUJ3 575 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 KRT37O76014 449 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 SYF2O95926 243 aaKnown RBP13.35□□□□□ -0.27
SSR4-202ENST00000370085 C1QAP02745 245 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 ANKRD34CP0C6C1 535 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 HOXB3P14651 431 aaPredicted RBP13.35□□□□□ -0.27
SSR4-202ENST00000370085 ZNF37AP17032 561 aaPredicted RBP13.35□□□□□ -0.27
SSR4-202ENST00000370085 POLR2CP19387 275 aaPredicted RBP13.35□□□□□ -0.27
SSR4-202ENST00000370085 RBMS1P29558 406 aaKnown RBP13.35□□□□□ -0.27
SSR4-202ENST00000370085 PKLRP30613 574 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 MLLT3P42568 568 aaPredicted RBP13.35□□□□□ -0.27
SSR4-202ENST00000370085 CLDN6P56747 220 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 TAS2R39P59534 338 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 RAB10P61026 200 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 KIR2DS3Q14952 304 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 ARHGAP19Q14CB8 494 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 EFTUD2Q15029 972 aaKnown RBP eCLIP13.35□□□□□ -0.273e-6■■■■■ 41.9
SSR4-202ENST00000370085 ERCC6LQ2NKX8 1250 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 TAF1BQ53T94 588 aaPredicted RBP13.35□□□□□ -0.27
SSR4-202ENST00000370085 CACHD1Q5VU97 1274 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 ANKS6Q68DC2 871 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 PIWIL4Q7Z3Z4 852 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms