RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CYP2U1Q7Z449 544 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 PLD3Q8IV08 490 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 APCDD1Q8J025 514 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 MZB1Q8WU39 189 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 FRG2BQ96QU4 278 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 TRMT61BQ9BVS5 477 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 MRPS26Q9BYN8 205 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 IGSF5Q9NSI5 407 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 HEBP2Q9Y5Z4 205 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 MROH6A6NGR9 719 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ISM1B1AKI9 464 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 FPGTO14772 594 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SUV39H1O43463 412 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 OR1I1O60431 355 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 LEFTY1O75610 366 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 TIPRLO75663 272 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC6A2P23975 617 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 VARSP26640 1264 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 HOXD9P28356 352 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 IFNGR2P38484 337 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ARCN1P48444 511 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 NRIP1P48552 1158 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 CLK1P49759 484 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 STK19P49842 368 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF140P52738 457 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 MTTPP55157 894 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 GRSF1Q12849 480 aaKnown RBP eCLIP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 PWP1Q13610 501 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ELAVL3Q14576 367 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 CDKL4Q5MAI5 379 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SPESP1Q6UW49 350 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 Q6ZVL8 140 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 TMEM126BQ8IUX1 230 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 NRSN1Q8IZ57 195 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 NATD1Q8N6N6 113 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF513Q8N8E2 541 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 DRAXINQ8NBI3 349 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC43A3Q8NBI5 491 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 OR13J1Q8NGT2 312 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 CLHC1Q8NHS4 586 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ISL2Q96A47 359 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC47A1Q96FL8 570 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 HBEGFQ99075 208 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 KLHL42Q9P2K6 505 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 VPS29Q9UBQ0 182 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 TRPS1Q9UHF7 1281 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF229Q9UJW7 825 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 PPM1HQ9ULR3 514 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SPO11Q9Y5K1 396 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 AK5Q9Y6K8 562 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 IQCF5A8MTL0 148 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 MANBAO00462 879 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ATP6V1G1O75348 118 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SERPINB7O75635 380 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 BCAS2O75934 225 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 FGF4P08620 206 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ATXN1LP0C7T5 689 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SRCP12931 536 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 EPORP19235 508 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CD70P32970 193 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 WASP42768 502 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SSR2P43308 183 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 MBTPS1Q14703 1052 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 DHCR24Q15392 516 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 TYSND1Q2T9J0 566 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CCNYL2Q5T2Q4 361 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF776Q68DI1 518 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CCSAPQ6IQ19 270 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 LRRTM4Q86VH4 590 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 MMAAQ8IVH4 418 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 HDDC3Q8N4P3 179 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 MRPL43Q8N983 215 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 TSPAN14Q8NG11 270 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 OR4A15Q8NGL6 344 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SMARCD2Q92925 531 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 GLYATL1Q969I3 302 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ITFG2Q969R8 447 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 UTP4Q969X6 686 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 MCCC1Q96RQ3 725 aaPredicted RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 ACAT2Q9BWD1 397 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 YIPF2Q9BWQ6 316 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CPEB1Q9BZB8 566 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 NDEL1Q9GZM8 345 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 RNF38Q9H0F5 515 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 WDR26Q9H7D7 661 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 PREBQ9HCU5 417 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 INTS7Q9NVH2 962 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 TMEM45AQ9NWC5 275 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 CACNA2D2Q9NY47 1150 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 USE1Q9NZ43 259 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 IL37Q9NZH6 218 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 EMCNQ9ULC0 261 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 OAS3Q9Y6K5 1087 aaKnown RBP5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 SCN1AP35498 2009 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 PLXNB2O15031 1838 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 FAM92AA1XBS5 289 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 LOC730098B7Z3J9 87 aa5.2□□□□□ -1.58
SMNDC1-202ENST00000369603 K7ERQ8 282 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms