RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 EXD2Q9NVH0 621 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.08■□□□□ 0.332e-10■■■■■ 34.7
CHTOP-203ENST00000368690 FBXO10Q9UK96 956 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 IKZF3Q9UKT9 509 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 BPTFQ12830 3046 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 HAT1O14929 419 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 OR4F21O95013 312 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 FGF1P05230 155 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 HLA-DPA1P20036 260 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 CD9P21926 228 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 ARPC4P59998 168 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 GBX1Q14549 363 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 IHHQ14623 411 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 CES5AQ6NT32 575 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 SERINC5Q86VE9 423 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 TSPYL5Q86VY4 417 aaPredicted RBP17.08■□□□□ 0.32
CHTOP-203ENST00000368690 GLB1L3Q8NCI6 653 aaPredicted RBP17.08■□□□□ 0.32
CHTOP-203ENST00000368690 ZNF540Q8NDQ6 660 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 THUMPD3Q9BV44 507 aaKnown RBP17.08■□□□□ 0.32
CHTOP-203ENST00000368690 EMILIN2Q9BXX0 1053 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 ITPAQ9BY32 194 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 AGO3Q9H9G7 860 aaKnown RBP17.08■□□□□ 0.32
CHTOP-203ENST00000368690 GALPQ9UBC7 116 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 UXTQ9UBK9 157 aaPredicted RBP17.08■□□□□ 0.32
CHTOP-203ENST00000368690 MED16Q9Y2X0 877 aa17.08■□□□□ 0.32
CHTOP-203ENST00000368690 CDC7O00311 574 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 TBX1O43435 398 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 SCO2O43819 266 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 CREG1O75629 220 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 EPOP01588 193 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 KRT8P05787 483 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 PFKLP17858 780 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 PPP3CCP48454 512 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 TRPC1P48995 793 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 AGTR2P50052 363 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 DGKQP52824 942 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 ITKQ08881 620 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 DGCR6Q14129 220 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 RUNDC3AQ59EK9 446 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 CPZQ66K79 652 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 LHX8Q68G74 356 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
CHTOP-203ENST00000368690 DESI1Q6ICB0 168 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 MSANTD2Q6P1R3 559 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 CCDC81Q6ZN84 652 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 USP43Q70EL4 1123 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 DET1Q7L5Y6 550 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 CLIP4Q8N3C7 705 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 AMER2Q8N7J2 671 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 ARRDC2Q8TBH0 407 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 BRSK1Q8TDC3 778 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 C1orf74Q96LT6 269 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 CCDC59Q9P031 241 aaKnown RBP17.07■□□□□ 0.32
CHTOP-203ENST00000368690 UTS2RQ9UKP6 389 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 NDRG4Q9ULP0 352 aaKnown RBP17.07■□□□□ 0.32
CHTOP-203ENST00000368690 PKP3Q9Y446 797 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 TRPV2Q9Y5S1 764 aa17.07■□□□□ 0.32
CHTOP-203ENST00000368690 FADS2O95864 444 aaKnown RBP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 PCSK1P29120 753 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 CLK3P49761 638 aaKnown RBP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 DEFA1P59665 94 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 DEFA3P59666 94 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 AGAP6Q5VW22 663 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 KDM4DQ6B0I6 523 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 CYP4Z1Q86W10 505 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 CALHM3Q86XJ0 350 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 PLPP6Q8IY26 295 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 CDYL2Q8N8U2 506 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 PYURFQ96I23 114 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 AGAP4Q96P64 663 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 ABCC13Q9NSE7 274 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 NUDT5Q9UKK9 219 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 MOXD2PA6NHM9 499 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 PTGESO14684 152 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 IDH3BO43837 385 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 S100BP04271 92 aaPredicted RBP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 CLK1P49759 484 aaKnown RBP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 ERVPABLB-1P60509 514 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 MAXP61244 160 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 SLC10A7Q0GE19 358 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 MAD2L1BPQ15013 274 aaPredicted RBP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 PROX2Q3B8N5 592 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 COLEC12Q5KU26 742 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 LAIR1Q6GTX8 287 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 RPL3LQ92901 407 aaKnown RBP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 PPP3R2Q96LZ3 170 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 CCDC177Q9NQR7 707 aaPredicted RBP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 STARD7Q9NQZ5 370 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHTOP-203ENST00000368690 IPPQ9Y573 584 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 GMPPBQ9Y5P6 360 aa17.06■□□□□ 0.32
CHTOP-203ENST00000368690 A0A1W2PQ45 241 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-203ENST00000368690 A0A1W2PQY0 241 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 NPEPPSL1A6NEC2 478 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 FAM20BO75063 409 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms