RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 LSSP48449 732 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 TRA2AQ13595 282 aaKnown RBP eCLIP14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 KLHL38Q2WGJ6 581 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 CCSMST1Q4G0I0 132 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 UNC5DQ6UXZ4 953 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 OOSP2Q86WS3 158 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 CPNE9Q8IYJ1 553 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 FBXO39Q8N4B4 442 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 GPATCH11Q8N954 259 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 PPM1MQ96MI6 270 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 OLFM1Q99784 485 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 MCMBPQ9BTE3 642 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 FUT8Q9BYC5 575 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 RAB33BQ9H082 229 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 SRMSQ9H3Y6 488 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 EPHA6Q9UF33 1036 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 MTRF1LQ9UGC7 380 aaKnown RBP14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 BTN3A1O00481 513 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 VPS26AO75436 327 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 CCL4P13236 92 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 ATP5DP30049 168 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 CASP8Q14790 479 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 EFTUD2Q15029 972 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 KYNUQ16719 465 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 HECTD2Q5U5R9 776 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 HDXQ7Z353 690 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 SLC26A11Q86WA9 606 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 ZC3HC1Q86WB0 502 aaKnown RBP14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 AMIGO1Q86WK6 493 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 ADGRF3Q8IZF5 1079 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 INPP5DQ92835 1189 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 FMO2Q99518 471 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 MENTQ9BUN1 341 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 FAM129AQ9BZQ8 928 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 OCIAD1Q9NX40 245 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 NINJ2Q9NZG7 142 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 PISDQ9UG56 409 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 POLG2Q9UHN1 485 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 HGSO14964 777 aaPredicted RBP14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 MATN4O95460 622 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 C1orf105O95561 183 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 GSTA2P09210 222 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 SEPHS1P49903 392 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 EIF3IQ13347 325 aaKnown RBP14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 KBTBD12Q3ZCT8 623 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 KLHL35Q6PF15 583 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 DCUN1D3Q8IWE4 304 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 FBF1Q8TES7 1133 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 PMEPA1Q969W9 287 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 IL17FQ96PD4 163 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 MAP3K3Q99759 626 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 CMKLR1Q99788 373 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 CCDC86Q9H6F5 360 aaKnown RBP14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 ASCL3Q9NQ33 180 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 KLHL42Q9P2K6 505 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 TRMT6Q9UJA5 497 aaKnown RBP14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 PCDHGA8Q9Y5G5 932 aa14.63□□□□□ -0.07
SMPDL3A-201ENST00000368440 RASSF9O75901 435 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 FDXRP22570 491 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 KPNA2P52292 529 aaKnown RBP14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 TTLL9Q3SXZ7 439 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 CACHD1Q5VU97 1274 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 EMBQ6PCB8 327 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 PAQR3Q6TCH7 311 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 CYHR1Q6ZMK1 362 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 CYS1Q717R9 158 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 PIWIL4Q7Z3Z4 852 aaKnown RBP14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 ZDHHC12Q96GR4 267 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 ELMO2Q96JJ3 720 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 CDC42EP4Q9H3Q1 356 aaKnown RBP14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 TAS2R13Q9NYV9 303 aa14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 CORO1CQ9ULV4 474 aaPredicted RBP14.62□□□□□ -0.07
SMPDL3A-201ENST00000368440 IGHV5-51A0A0C4DH38 117 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 FAM95CA0A1B0GW59 222 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 GSAPA4D1B5 854 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 ARHGEF33A8MVX0 844 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 FAM155BO75949 473 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 TNFSF15O95150 251 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 ANKRD34CP0C6C1 535 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 JMJD7P0C870 316 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 FGF3P11487 239 aaPredicted RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 PEBP1P30086 187 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 PKLRP30613 574 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 CSTF2P33240 577 aaKnown RBP eCLIP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 MAPK10P53779 464 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 FAM45BPQ6NSW5 357 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 PRSS42Q7Z5A4 293 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 LINC01555Q8NAE3 123 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 AGBL5Q8NDL9 886 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 FAM45AQ8TCE6 357 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 EEF1AKMT1Q8WVE0 214 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 ZCCHC14Q8WYQ9 949 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 CDKL2Q92772 493 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 VPS39Q96JC1 886 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 SLC46A1Q96NT5 459 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 RHOJQ9H4E5 214 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 NSMCE4AQ9NXX6 385 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 SPHK1Q9NYA1 384 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 POMT2Q9UKY4 750 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms