RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 EML3Q32P44 896 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 TIGD2Q4W5G0 525 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 MTX3Q5HYI7 312 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 HABP4Q5JVS0 413 aaKnown RBP13.71□□□□□ -0.21
USF1-202ENST00000368020 CYP2R1Q6VVX0 501 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 ADGRG2Q8IZP9 1017 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 CELF5Q8N6W0 485 aaKnown RBP13.71□□□□□ -0.21
USF1-202ENST00000368020 DDHD1Q8NEL9 900 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 OR8J3Q8NGG0 315 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 ASZ1Q8WWH4 475 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 ASB11Q8WXH4 323 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 USP7Q93009 1102 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 CCDC97Q96F63 343 aaPredicted RBP13.71□□□□□ -0.21
USF1-202ENST00000368020 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 SH3GL1Q99961 368 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 NDUFA13Q9P0J0 144 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 IL36AQ9UHA7 158 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 MAGEL2Q9UJ55 1249 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 FBXO10Q9UK96 956 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 CNOT6Q9ULM6 557 aaKnown RBP13.71□□□□□ -0.21
USF1-202ENST00000368020 MANBAO00462 879 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 ARPC2O15144 300 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 UGDHO60701 494 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 KCNH1O95259 989 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 LINGO3P0C6S8 592 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 G6PDP11413 515 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 SLC2A4P14672 509 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 FSHRP23945 695 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 CA5AP35218 305 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 MTHFRP42898 656 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 HTR6P50406 440 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 ST8SIA6P61647 398 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 B4GALNT1Q00973 533 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 DLX2Q07687 328 aaPredicted RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 CAPRIN1Q14444 709 aaKnown RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 ZNF805Q5CZA5 627 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 INTS11Q5TA45 600 aaKnown RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 ERAP2Q6P179 960 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 SCIMPQ6UWF3 145 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 DPPA4Q7L190 304 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 NRSN1Q8IZ57 195 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 CHST14Q8NCH0 376 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 SMRP1Q8NCR6 262 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 ITFG1Q8TB96 612 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 FRS2Q8WU20 508 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 VPS33AQ96AX1 596 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 SLCO4A1Q96BD0 722 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 ZNF597Q96LX8 424 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 NECTIN4Q96NY8 510 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 VPS35Q96QK1 796 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 CDX2Q99626 313 aaPredicted RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 FAM83CQ9BQN1 747 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 ACTR8Q9H981 624 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 LRTM1Q9HBL6 345 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 C1orf109Q9NX04 203 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 KLQ9UEF7 1012 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 TSR3Q9UJK0 312 aaKnown RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 ZNF490Q9ULM2 529 aaPredicted RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 PDE10AQ9Y233 779 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 TMED5Q9Y3A6 229 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 CCL27Q9Y4X3 112 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 POLR3HQ9Y535 204 aaPredicted RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 SERTM1A2A2V5 107 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 ASPDHA6ND91 283 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 NPIPB8E9PQR5 432 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 GFYI3L273 518 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 ANKRD28O15084 1053 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 AKAP10O43572 662 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 GMNNO75496 209 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 RSL1D1O76021 490 aaKnown RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 ZNF26P17031 533 aaPredicted RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 CEBPBP17676 345 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 ATP6V1B2P21281 511 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 PRPH2P23942 346 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 FASP25445 335 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 GSK3BP49841 420 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 CCR3P51677 355 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 RPL38P63173 70 aaKnown RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 LIPEQ05469 1076 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 PWP1Q13610 501 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 C18orf21Q32NC0 220 aaPredicted RBP13.7□□□□□ -0.22
USF1-202ENST00000368020 TBCELQ5QJ74 424 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 NANOGP8Q6NSW7 305 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 UGT2A3Q6UWM9 527 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 TBC1D21Q8IYX1 336 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 DCBLD1Q8N8Z6 715 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 DNAJB14Q8TBM8 379 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 CANT1Q8WVQ1 401 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 ATL1Q8WXF7 558 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 LRTOMTQ8WZ04 291 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 TEX37Q96LM6 180 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 OSBPL6Q9BZF3 934 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 NANOGQ9H9S0 305 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 PCDHB3Q9Y5E6 796 aa13.7□□□□□ -0.22
USF1-202ENST00000368020 EIF4E1BA6NMX2 242 aaKnown RBP13.69□□□□□ -0.22
USF1-202ENST00000368020 ZNF839A8K0R7 811 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 HOXC11O43248 304 aaPredicted RBP13.69□□□□□ -0.22
USF1-202ENST00000368020 LEFTY1O75610 366 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 ZCCHC18P0CG32 403 aa13.69□□□□□ -0.22
USF1-202ENST00000368020 PRPS2P11908 318 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms