RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ITFG1Q8TB96 612 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PYDC1Q8WXC3 89 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 EDEM1Q92611 657 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PIMREGQ9BSJ6 248 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CDC42EP4Q9H3Q1 356 aaKnown RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SMURF2Q9HAU4 748 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ADPRHL2Q9NX46 363 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 RPL26L1Q9UNX3 145 aaKnown RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CLCA3PQ9Y6N3 262 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 GLSO94925 669 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CBX6O95503 412 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 APOC3P02656 99 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 TFPTP0C1Z6 253 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 THRBP10828 461 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CHRNB1P11230 501 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ALDH3A2P51648 485 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 MYL6P60660 151 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PPP2R2BQ00005 443 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 IRF8Q02556 426 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ADIGQ0VDE8 80 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 LRIF1Q5T3J3 769 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 WSCD1Q658N2 575 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CYP2R1Q6VVX0 501 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SLC30A10Q6XR72 485 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 NUP54Q7Z3B4 507 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 UNC5BQ8IZJ1 945 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ZNF321PQ8N8H1 164 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SLC30A5Q8TAD4 765 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 JPH3Q8WXH2 748 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 AP2M1Q96CW1 435 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 MCEEQ96PE7 176 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PAPOLGQ9BWT3 736 aaKnown RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 DSN1Q9H410 356 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ACTL8Q9H568 366 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 GPN2Q9H9Y4 310 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 GPAMQ9HCL2 828 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 MED11Q9P086 117 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 LEF1Q9UJU2 399 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PTPRZ1P23471 2315 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 EML1O00423 815 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 FOXN1O15353 648 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 IRAK2O43187 625 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 JCHAINP01591 159 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CRYBA1P05813 215 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PVALBP20472 110 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CAPGP40121 348 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PGS1Q32NB8 556 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 RAP1GAP2Q684P5 730 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 DUPD1Q68J44 220 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 MSANTD2Q6P1R3 559 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 NET1Q7Z628 596 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PIM3Q86V86 326 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 TIGD4Q8IY51 512 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 FBXO36Q8NEA4 188 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ZSWIM2Q8NEG5 633 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SHC3Q92529 594 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SH2D3AQ9BRG2 576 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CARS2Q9HA77 564 aaKnown RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 C3orf18Q9UK00 162 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 YARS2Q9Y2Z4 477 aaKnown RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 MFHAS1Q9Y4C4 1052 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 KDM3BQ7LBC6 1761 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 TRAFD1O14545 582 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CSTBP04080 98 aaKnown RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 SERPINE1P05121 402 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CNR2P34972 360 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 FAUP35544 74 aaKnown RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CDC42P60953 191 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 PTGES3Q15185 160 aaKnown RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 NR0B2Q15466 257 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 TAZQ16635 292 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 SHC4Q6S5L8 630 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 GRASPQ7Z6J2 395 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 MB21D2Q8IYB1 491 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 UBE2J2Q8N2K1 259 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 Q8N9G6 341 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 FAM71DQ8N9W8 422 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 NCSTNQ92542 709 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 SLC25A23Q9BV35 468 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 SEMA6AQ9H2E6 1030 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 PIF1Q9H611 641 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 REEP1Q9H902 201 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CLK4Q9HAZ1 481 aaKnown RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CCNB1IP1Q9NPC3 277 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 GFOD1Q9NXC2 390 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 MTF2Q9Y483 593 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 TAF6LQ9Y6J9 622 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 LRP6O75581 1613 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 COL16A1Q07092 1604 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 AGPSO00116 658 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CAPN5O15484 640 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 ETS1P14921 441 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CYP3A5P20815 502 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 MAGEA3P43357 314 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CDH11P55287 796 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 XIAPP98170 497 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CDK16Q00536 496 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 IFI44LQ53G44 452 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CRTC3Q6UUV7 619 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 DHDDSQ86SQ9 333 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms